RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 F8WDY8 70 aa5.12□□□□□ -1.59
SORT1-209ENST00000538502 Q6ZQY7 126 aa5.12□□□□□ -1.59
SORT1-209ENST00000538502 CACNA1EQ15878 2313 aa5.12□□□□□ -1.59
SORT1-209ENST00000538502 DEFB114Q30KQ6 69 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 Q8N814 137 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 URB1-AS1Q96HZ7 61 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 DEFB1P60022 68 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 C1orf229Q6ZS94 237 aaPredicted RBP5.11□□□□□ -1.59
SORT1-209ENST00000538502 C1orf158Q8N1D5 194 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 IGLV4-69A0A075B6H9 119 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
SORT1-209ENST00000538502 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
SORT1-209ENST00000538502 EP300Q09472 2414 aaPredicted RBP5.1□□□□□ -1.59
SORT1-209ENST00000538502 LINC00959A0A1B0GUT2 108 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 SYCNQ0VAF6 134 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 LINC01561Q8N1V8 128 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 DEFB135Q30KP9 77 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 DYSFO75923 2080 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 LINC01546A6NGU7 62 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 C3orf84H3BNL1 204 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 ADORA2A-AS1P86434 159 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 CXCL6P80162 114 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 MSMPQ1L6U9 139 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 Q6YL49 198 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 ATG2AQ2TAZ0 1938 aa5.1□□□□□ -1.59
SORT1-209ENST00000538502 CRYGDP07320 174 aa5.09□□□□□ -1.59
SORT1-209ENST00000538502 GRNP28799 593 aaKnown RBP5.09□□□□□ -1.59
SORT1-209ENST00000538502 Q8N6K4 173 aa5.09□□□□□ -1.59
SORT1-209ENST00000538502 CRYGAP11844 174 aa5.09□□□□□ -1.59
SORT1-209ENST00000538502 CDC42SE2Q9NRR3 84 aa5.09□□□□□ -1.59
SORT1-209ENST00000538502 LELP1Q5T871 98 aa5.09□□□□□ -1.6
SORT1-209ENST00000538502 POM121L12Q8N7R1 296 aa5.09□□□□□ -1.6
SORT1-209ENST00000538502 COL4A4P53420 1690 aaPredicted RBP5.08□□□□□ -1.6
SORT1-209ENST00000538502 hDV103S1A0JD37 113 aa5.08□□□□□ -1.6
SORT1-209ENST00000538502 LIMD2Q9BT23 127 aa5.08□□□□□ -1.6
SORT1-209ENST00000538502 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
SORT1-209ENST00000538502 SPTBN2O15020 2390 aa5.08□□□□□ -1.6
SORT1-209ENST00000538502 GTF3C1Q12789 2109 aa5.08□□□□□ -1.6
SORT1-209ENST00000538502 AMELXQ99217 191 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 CDIP1Q9H305 208 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 ESM1Q9NQ30 184 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 J3QKU1 62 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 LMO4P61968 165 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 TRIOBPQ9H2D6 2365 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 COL6A6A6NMZ7 2263 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 CHCHD7Q9BUK0 85 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 LINC00474Q9P2X8 69 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 USF3Q68DE3 2245 aa5.07□□□□□ -1.6
SORT1-209ENST00000538502 PLA2G5P39877 138 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 ZGRF1Q86YA3 2104 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 C22orf34Q6ZV56 151 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 ABCA4P78363 2273 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 CACNA1BQ00975 2339 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 PKDREJQ9NTG1 2253 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 PRR9Q5T870 116 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 LTBP2Q14767 1821 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
SORT1-209ENST00000538502 ESRGQ1W209 222 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 C10orf25Q5T742 122 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 A8MZ25 164 aa5.06□□□□□ -1.6
SORT1-209ENST00000538502 A0A087WZ39 114 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 LINC00242Q5T6M2 205 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 ROS1P08922 2347 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 IGLV2-18A0A075B6J9 118 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 LINC01548A6NM66 108 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 BRI3O95415 125 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 HILS1P60008 231 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 TMEM254Q8TBM7 123 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 DCANP1Q8TF63 244 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 A0A1B0GW54 56 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 EGFEM1PQ0D2K5 195 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 Q8N3U1 123 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 A0A087WYN8 130 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 PROK1P58294 105 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 XAGE1AQ9HD64 81 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 RETNQ9HD89 108 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
SORT1-209ENST00000538502 ARHGAP21Q5T5U3 1957 aa5.04□□□□□ -1.6
SORT1-209ENST00000538502 CNOT1A5YKK6 2376 aaKnown RBP5.04□□□□□ -1.6
SORT1-209ENST00000538502 IGLV1-40P01703 118 aa5.04□□□□□ -1.6
SORT1-209ENST00000538502 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
SORT1-209ENST00000538502 ACACAQ13085 2346 aa5.04□□□□□ -1.6
SORT1-209ENST00000538502 CELA1Q9UNI1 258 aa5.04□□□□□ -1.6
SORT1-209ENST00000538502 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 SHANK1Q9Y566 2161 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 C1orf137Q5JT78 98 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 LINC00208Q96KT6 92 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 A0A087WVE0 104 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 A0A096LNJ9 63 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 DEFB4AO15263 64 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 C11orf71Q6IPW1 123 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 C7orf33Q8WU49 177 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 DEFB131BA0A096LNP1 70 aa5.03□□□□□ -1.6
SORT1-209ENST00000538502 GAS8-AS1O95177 125 aa5.03□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms