RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FOXI1Q12951 378 aa5.41□□□□□ -1.54
SPARC-208ENST00000538026 RNASEKQ6P5S7 137 aaKnown RBP5.41□□□□□ -1.54
SPARC-208ENST00000538026 MRPL52Q86TS9 123 aaKnown RBP5.41□□□□□ -1.54
SPARC-208ENST00000538026 CHCHD10Q8WYQ3 142 aaPredicted RBP5.41□□□□□ -1.54
SPARC-208ENST00000538026 LINC00959A0A1B0GUT2 108 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 LINC00862A6NCI5 91 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 PPP1R2P9O14990 202 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 C10orf91Q5T1B1 145 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 Q5VSD8 79 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 SCXQ7RTU7 201 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 ATP5L2Q7Z4Y8 100 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 OR5A1Q8NGJ0 315 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 C20orf78Q9BR46 151 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 UBE2D4Q9Y2X8 147 aa5.4□□□□□ -1.54
SPARC-208ENST00000538026 C7orf77A4D0Y5 90 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 MT-ND4LP03901 98 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 ZNF25P17030 456 aaPredicted RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 UQCC3Q6UW78 93 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 ZNF664Q8N3J9 261 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 CIRBP-AS1Q8TBR5 109 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 ANAPC16Q96DE5 110 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 CHAC1Q9BUX1 264 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
SPARC-208ENST00000538026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
SPARC-208ENST00000538026 PRSS47A8MTI9 375 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 F8W036 122 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 TCAPO15273 167 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 PPP1R17O96001 155 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 Q6ZUT4 128 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 COMMD7Q86VX2 200 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 CLRN3Q8NCR9 226 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
SPARC-208ENST00000538026 CSDC2Q9Y534 153 aaKnown RBP5.38□□□□□ -1.55
SPARC-208ENST00000538026 hDV102S1A0JD36 115 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 PHOX2AO14813 284 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 CCL25O15444 150 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 XCL1P47992 114 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 ORMDL3Q8N138 153 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 SEC11CQ9BY50 192 aa5.37□□□□□ -1.55
SPARC-208ENST00000538026 GVQW2A0A096LPI5 108 aaPredicted RBP5.36□□□□□ -1.55
SPARC-208ENST00000538026 PPBPP02775 128 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 S100A8P05109 93 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 CHTF8P0CG12 524 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 FCER1GP30273 86 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 CIRBPQ14011 172 aaKnown RBP5.36□□□□□ -1.55
SPARC-208ENST00000538026 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 IMMP2LQ96T52 175 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 KIR2DL4Q99706 377 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 TIMM21Q9BVV7 248 aa5.36□□□□□ -1.55
SPARC-208ENST00000538026 LOC389332A0A1B0GUA5 103 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 KIAA1644Q3SXP7 199 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 CD164L2Q6UWJ8 174 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 LINC00528Q8N1L1 170 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 TMEM101Q96IK0 257 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 CTDSP1Q9GZU7 261 aa5.35□□□□□ -1.55
SPARC-208ENST00000538026 CARHSP1Q9Y2V2 147 aaKnown RBP5.35□□□□□ -1.55
SPARC-208ENST00000538026 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
SPARC-208ENST00000538026 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
SPARC-208ENST00000538026 TRAV13-1A0A0B4J241 112 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 IFI27P40305 119 aaPredicted RBP5.33□□□□□ -1.56
SPARC-208ENST00000538026 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
SPARC-208ENST00000538026 COX6A2Q02221 97 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 Q8N8P6 123 aa5.33□□□□□ -1.56
SPARC-208ENST00000538026 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 IGHV1-58A0A0C4DH39 117 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 A6NJY4 79 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 C1orf196B1AJZ1 125 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
SPARC-208ENST00000538026 SS18Q15532 418 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 SPACA4Q8TDM5 124 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 SPANXA1Q9NS26 97 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 PYGO1Q9Y3Y4 419 aa5.32□□□□□ -1.56
SPARC-208ENST00000538026 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 IGHV3-64A0A075B6Q5 118 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 TRAV9-1A0A075B6T8 112 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 A0A087WYN8 130 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 ALKBH7Q9BT30 221 aaPredicted RBP5.31□□□□□ -1.56
SPARC-208ENST00000538026 MAP1LC3AQ9H492 121 aa5.31□□□□□ -1.56
SPARC-208ENST00000538026 AP5S1Q9NUS5 200 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms