RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 MYCBP2O75592 4640 aa11.1□□□□□ -0.63
SFSWAP-205ENST00000537164 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 CKS2P33552 79 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
SFSWAP-205ENST00000537164 IGKV3OR2-268A0A0C4DH90 116 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 hDV102S1A0JD36 115 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 PHOX2AO14813 284 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 PPBPP02775 128 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 SLPIP03973 132 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 FCER1GP30273 86 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 IFITM2Q01629 132 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
SFSWAP-205ENST00000537164 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
SFSWAP-205ENST00000537164 TCAPO15273 167 aa11.07□□□□□ -0.64
SFSWAP-205ENST00000537164 TNFRSF6BO95407 300 aa11.07□□□□□ -0.64
SFSWAP-205ENST00000537164 FOXI1Q12951 378 aa11.07□□□□□ -0.64
SFSWAP-205ENST00000537164 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
SFSWAP-205ENST00000537164 D6R8Y8 96 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 MT-ND4LP03901 98 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
SFSWAP-205ENST00000537164 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
SFSWAP-205ENST00000537164 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
SFSWAP-205ENST00000537164 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
SFSWAP-205ENST00000537164 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
SFSWAP-205ENST00000537164 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 CCL25O15444 150 aa11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 NPYP01303 97 aa11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
SFSWAP-205ENST00000537164 SS18Q15532 418 aa11.03□□□□□ -0.64
SFSWAP-205ENST00000537164 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
SFSWAP-205ENST00000537164 TMEM18Q96B42 140 aa11.03□□□□□ -0.64
SFSWAP-205ENST00000537164 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-205ENST00000537164 PRSS47A8MTI9 375 aa11.02□□□□□ -0.65
SFSWAP-205ENST00000537164 XCL1P47992 114 aa11.02□□□□□ -0.65
SFSWAP-205ENST00000537164 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
SFSWAP-205ENST00000537164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-205ENST00000537164 IGHV3-64A0A075B6Q5 118 aa11.01□□□□□ -0.65
SFSWAP-205ENST00000537164 PANO1I0J062 215 aa11.01□□□□□ -0.65
SFSWAP-205ENST00000537164 ADCYAP1P18509 176 aa11.01□□□□□ -0.65
SFSWAP-205ENST00000537164 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
SFSWAP-205ENST00000537164 TMEM136Q6ZRR5 245 aa11.01□□□□□ -0.65
SFSWAP-205ENST00000537164 TMEM218A2RU14 115 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 C1orf196B1AJZ1 125 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 FAM104AQ969W3 186 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 PRELID3AQ96N28 172 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 IMMP2LQ96T52 175 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
SFSWAP-205ENST00000537164 IGHV1-58A0A0C4DH39 117 aa10.99□□□□□ -0.65
SFSWAP-205ENST00000537164 HIGD2BQ4VC39 106 aa10.99□□□□□ -0.65
SFSWAP-205ENST00000537164 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-205ENST00000537164 Q6ZUT4 128 aa10.98□□□□□ -0.65
SFSWAP-205ENST00000537164 SPANXA1Q9NS26 97 aa10.98□□□□□ -0.65
SFSWAP-205ENST00000537164 MRPS36P82909 103 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-205ENST00000537164 SEC11CQ9BY50 192 aa10.97□□□□□ -0.65
SFSWAP-205ENST00000537164 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
SFSWAP-205ENST00000537164 HERC1Q15751 4861 aa10.96□□□□□ -0.65
SFSWAP-205ENST00000537164 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
SFSWAP-205ENST00000537164 SPACA4Q8TDM5 124 aa10.95□□□□□ -0.66
SFSWAP-205ENST00000537164 TRAV9-1A0A075B6T8 112 aa10.94□□□□□ -0.66
SFSWAP-205ENST00000537164 TRAV13-1A0A0B4J241 112 aa10.94□□□□□ -0.66
SFSWAP-205ENST00000537164 RAB5AP20339 215 aa10.94□□□□□ -0.66
SFSWAP-205ENST00000537164 PYGO1Q9Y3Y4 419 aa10.94□□□□□ -0.66
SFSWAP-205ENST00000537164 COX7A2LO14548 114 aa10.93□□□□□ -0.66
SFSWAP-205ENST00000537164 COX6A2Q02221 97 aa10.93□□□□□ -0.66
SFSWAP-205ENST00000537164 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
SFSWAP-205ENST00000537164 A0A087WYN8 130 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 CHTF8P0CG12 524 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 C10orf91Q5T1B1 145 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 Q8N8P6 123 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
SFSWAP-205ENST00000537164 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
SFSWAP-205ENST00000537164 K7EMI3 77 aa10.91□□□□□ -0.66
SFSWAP-205ENST00000537164 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-205ENST00000537164 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 MALP21145 153 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 PKIGQ9Y2B9 76 aa10.9□□□□□ -0.66
SFSWAP-205ENST00000537164 LOC389332A0A1B0GUA5 103 aa10.89□□□□□ -0.67
SFSWAP-205ENST00000537164 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-205ENST00000537164 SYCNQ0VAF6 134 aa10.89□□□□□ -0.67
SFSWAP-205ENST00000537164 PKHD1L1Q86WI1 4243 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
SFSWAP-205ENST00000537164 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms