RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 NAT8BQ9UHF3 227 aa9.11□□□□□ -0.95
RTN3P1-201ENST00000536295 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
RTN3P1-201ENST00000536295 LRP1Q07954 4544 aaKnown RBP9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 TRBV27A0A0K0K1C4 114 aa9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 HNRNPA3P51991 378 aaKnown RBP9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 NAT8Q9UHE5 227 aa9.1□□□□□ -0.95
RTN3P1-201ENST00000536295 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 A0A087WYN8 130 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 C7orf77A4D0Y5 90 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 FCER1GP30273 86 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 COX6A2Q02221 97 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 PEA15Q15121 130 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
RTN3P1-201ENST00000536295 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 VCYO14598 125 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 CAMPP49913 170 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 SS18Q15532 418 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 NRACQ8N912 160 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
RTN3P1-201ENST00000536295 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 PPP1R17O96001 155 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 OXTP01178 125 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 MAJINQ3KP22 176 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
RTN3P1-201ENST00000536295 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
RTN3P1-201ENST00000536295 FAM104BQ5XKR9 115 aa9.06□□□□□ -0.96
RTN3P1-201ENST00000536295 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
RTN3P1-201ENST00000536295 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
RTN3P1-201ENST00000536295 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 CKS2P33552 79 aa9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 MRPL54Q6P161 138 aaKnown RBP9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 UBE2D4Q9Y2X8 147 aa9.04□□□□□ -0.96
RTN3P1-201ENST00000536295 A0A096LNI7 61 aa9.03□□□□□ -0.96
RTN3P1-201ENST00000536295 A0A1B0GW15 77 aa9.03□□□□□ -0.96
RTN3P1-201ENST00000536295 STPG4Q8N801 248 aa9.03□□□□□ -0.96
RTN3P1-201ENST00000536295 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
RTN3P1-201ENST00000536295 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
RTN3P1-201ENST00000536295 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 LINC00862A6NCI5 91 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 ZNF561-AS1K7EIQ3 104 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 PHOX2AO14813 284 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 MALP21145 153 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 HBBP68871 147 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
RTN3P1-201ENST00000536295 C1orf196B1AJZ1 125 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 D6R8Y8 96 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 TNFRSF6BO95407 300 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 Q6ZUT4 128 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
RTN3P1-201ENST00000536295 F8W036 122 aa9□□□□□ -0.97
RTN3P1-201ENST00000536295 COX7A2LO14548 114 aa9□□□□□ -0.97
RTN3P1-201ENST00000536295 S100A8P05109 93 aa9□□□□□ -0.97
RTN3P1-201ENST00000536295 SYCNQ0VAF6 134 aa9□□□□□ -0.97
RTN3P1-201ENST00000536295 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 A0A1B0GXF2 115 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 NPYP01303 97 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 HMCN2Q8NDA2 5059 aa8.99□□□□□ -0.97
RTN3P1-201ENST00000536295 TCAPO15273 167 aa8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 Q6ZRU5 148 aa8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 TIMM21Q9BVV7 248 aa8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
RTN3P1-201ENST00000536295 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
RTN3P1-201ENST00000536295 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
RTN3P1-201ENST00000536295 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
RTN3P1-201ENST00000536295 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
RTN3P1-201ENST00000536295 PPBPP02775 128 aa8.95□□□□□ -0.98
RTN3P1-201ENST00000536295 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
RTN3P1-201ENST00000536295 ORMDL3Q8N138 153 aa8.95□□□□□ -0.98
RTN3P1-201ENST00000536295 SPANXA1Q9NS26 97 aa8.95□□□□□ -0.98
RTN3P1-201ENST00000536295 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 APOMO95445 188 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 PTTG1IPP53801 180 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 SPAG11BQ08648 103 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 TMEM136Q6ZRR5 245 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 ATP5L2Q7Z4Y8 100 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 FAM104AQ969W3 186 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
RTN3P1-201ENST00000536295 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
RTN3P1-201ENST00000536295 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
RTN3P1-201ENST00000536295 RAB5AP20339 215 aa8.93□□□□□ -0.98
RTN3P1-201ENST00000536295 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms