RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 FGF6P10767 208 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 V9GYV3 84 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 LRP1Q07954 4544 aaKnown RBP6.91□□□□□ -1.3
CCDC60-202ENST00000535685 PKHD1L1Q86WI1 4243 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 OXTP01178 125 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 RAB4AP20338 218 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 PMCHP20382 165 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 CEBPGP53567 150 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 IFITM2Q01629 132 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 AMMECR1LQ6DCA0 310 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 MRPL52Q86TS9 123 aaKnown RBP6.9□□□□□ -1.3
CCDC60-202ENST00000535685 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 SMDT1Q9H4I9 107 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 ST20Q9HBF5 79 aa6.9□□□□□ -1.3
CCDC60-202ENST00000535685 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-202ENST00000535685 IGKV2-29A2NJV5 120 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-202ENST00000535685 PANO1I0J062 215 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 PPP1R17O96001 155 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 TSHBP01222 138 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 RIGQ13278 110 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 NUP35Q8NFH5 326 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-202ENST00000535685 FAT3Q8TDW7 4589 aa6.89□□□□□ -1.31
CCDC60-202ENST00000535685 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-202ENST00000535685 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
CCDC60-202ENST00000535685 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
CCDC60-202ENST00000535685 RPL23P62829 140 aaKnown RBP6.88□□□□□ -1.31
CCDC60-202ENST00000535685 RNASEKQ6P5S7 137 aaKnown RBP6.88□□□□□ -1.31
CCDC60-202ENST00000535685 BTF3L4Q96K17 158 aa6.88□□□□□ -1.31
CCDC60-202ENST00000535685 SMIM27A0A1W2PRY6 76 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 VCYO14598 125 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 RPS10P46783 165 aaKnown RBP6.87□□□□□ -1.31
CCDC60-202ENST00000535685 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
CCDC60-202ENST00000535685 FOXI1Q12951 378 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
CCDC60-202ENST00000535685 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
CCDC60-202ENST00000535685 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 A0A1B0GW15 77 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 C9JQL5 133 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 CCL25O15444 150 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
CCDC60-202ENST00000535685 PEA15Q15121 130 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 NRACQ8N912 160 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 TMEM242Q9NWH2 141 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 PLAC8Q9NZF1 115 aa6.86□□□□□ -1.31
CCDC60-202ENST00000535685 A0A087WYN8 130 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 PPP1R2P9O14990 202 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 SMAGPQ0VAQ4 97 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 NDUFA5Q16718 116 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 FAM104BQ5XKR9 115 aa6.85□□□□□ -1.31
CCDC60-202ENST00000535685 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
CCDC60-202ENST00000535685 TCAPO15273 167 aa6.83□□□□□ -1.32
CCDC60-202ENST00000535685 SS18Q15532 418 aa6.83□□□□□ -1.32
CCDC60-202ENST00000535685 ADIRFQ15847 76 aa6.83□□□□□ -1.32
CCDC60-202ENST00000535685 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
CCDC60-202ENST00000535685 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
CCDC60-202ENST00000535685 KIR2DL4Q99706 377 aa6.83□□□□□ -1.32
CCDC60-202ENST00000535685 C1orf196B1AJZ1 125 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 SMKR1H3BMG3 65 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 S100A8P05109 93 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 FCER1GP30273 86 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 XCL1P47992 114 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
CCDC60-202ENST00000535685 COX6A2Q02221 97 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 Q6ZRU5 148 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 PRSS3P2Q8NHM4 247 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
CCDC60-202ENST00000535685 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
CCDC60-202ENST00000535685 PHOX2AO14813 284 aa6.81□□□□□ -1.32
CCDC60-202ENST00000535685 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
CCDC60-202ENST00000535685 TMEM18Q96B42 140 aa6.81□□□□□ -1.32
CCDC60-202ENST00000535685 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
CCDC60-202ENST00000535685 PPBPP02775 128 aa6.8□□□□□ -1.32
CCDC60-202ENST00000535685 HBBP68871 147 aa6.8□□□□□ -1.32
CCDC60-202ENST00000535685 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
CCDC60-202ENST00000535685 F8W036 122 aa6.79□□□□□ -1.32
CCDC60-202ENST00000535685 NPSP0C0P6 89 aa6.79□□□□□ -1.32
CCDC60-202ENST00000535685 CKS2P33552 79 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms