RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
UBXN1-217ENST00000534176 RPS10P46783 165 aaKnown RBP10.05□□□□□ -0.8
UBXN1-217ENST00000534176 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
UBXN1-217ENST00000534176 UQCC3Q6UW78 93 aa10.05□□□□□ -0.8
UBXN1-217ENST00000534176 NRACQ8N912 160 aa10.05□□□□□ -0.8
UBXN1-217ENST00000534176 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
UBXN1-217ENST00000534176 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
UBXN1-217ENST00000534176 SS18Q15532 418 aa10.04□□□□□ -0.8
UBXN1-217ENST00000534176 DEFB104AQ8WTQ1 72 aa10.04□□□□□ -0.8
UBXN1-217ENST00000534176 CHCHD10Q8WYQ3 142 aaPredicted RBP10.04□□□□□ -0.8
UBXN1-217ENST00000534176 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
UBXN1-217ENST00000534176 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
UBXN1-217ENST00000534176 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
UBXN1-217ENST00000534176 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
UBXN1-217ENST00000534176 LAMTOR2Q9Y2Q5 125 aa10.03□□□□□ -0.8
UBXN1-217ENST00000534176 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
UBXN1-217ENST00000534176 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.81
UBXN1-217ENST00000534176 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
UBXN1-217ENST00000534176 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
UBXN1-217ENST00000534176 SCXQ7RTU7 201 aa10.02□□□□□ -0.81
UBXN1-217ENST00000534176 ORMDL3Q8N138 153 aa10.02□□□□□ -0.81
UBXN1-217ENST00000534176 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
UBXN1-217ENST00000534176 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
UBXN1-217ENST00000534176 SMKR1H3BMG3 65 aa10.01□□□□□ -0.81
UBXN1-217ENST00000534176 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
UBXN1-217ENST00000534176 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
UBXN1-217ENST00000534176 LINC01620Q4KN68 170 aa10□□□□□ -0.81
UBXN1-217ENST00000534176 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
UBXN1-217ENST00000534176 IMMP2LQ96T52 175 aa10□□□□□ -0.81
UBXN1-217ENST00000534176 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
UBXN1-217ENST00000534176 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
UBXN1-217ENST00000534176 D6R8Y8 96 aa9.99□□□□□ -0.81
UBXN1-217ENST00000534176 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
UBXN1-217ENST00000534176 CIRBP-AS1Q8TBR5 109 aa9.99□□□□□ -0.81
UBXN1-217ENST00000534176 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
UBXN1-217ENST00000534176 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
UBXN1-217ENST00000534176 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 RAB5AP20339 215 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 FOXI1Q12951 378 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
UBXN1-217ENST00000534176 K7EMI3 77 aa9.97□□□□□ -0.81
UBXN1-217ENST00000534176 XCL1P47992 114 aa9.97□□□□□ -0.81
UBXN1-217ENST00000534176 HAMPP81172 84 aa9.97□□□□□ -0.81
UBXN1-217ENST00000534176 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
UBXN1-217ENST00000534176 CTDSP1Q9GZU7 261 aa9.97□□□□□ -0.81
UBXN1-217ENST00000534176 TRAV9-1A0A075B6T8 112 aa9.96□□□□□ -0.82
UBXN1-217ENST00000534176 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
UBXN1-217ENST00000534176 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
UBXN1-217ENST00000534176 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
UBXN1-217ENST00000534176 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
UBXN1-217ENST00000534176 TMEM218A2RU14 115 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 APOMO95445 188 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 MALP21145 153 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 G0S2P27469 103 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
UBXN1-217ENST00000534176 SEC11CQ9BY50 192 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 MAP1LC3AQ9H492 121 aa9.94□□□□□ -0.82
UBXN1-217ENST00000534176 COX7A2LO14548 114 aa9.93□□□□□ -0.82
UBXN1-217ENST00000534176 NPYP01303 97 aa9.93□□□□□ -0.82
UBXN1-217ENST00000534176 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
UBXN1-217ENST00000534176 DNAH8Q96JB1 4490 aa9.93□□□□□ -0.82
UBXN1-217ENST00000534176 S100PP25815 95 aa9.92□□□□□ -0.82
UBXN1-217ENST00000534176 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
UBXN1-217ENST00000534176 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
UBXN1-217ENST00000534176 SLPIP03973 132 aa9.91□□□□□ -0.82
UBXN1-217ENST00000534176 NPSP0C0P6 89 aa9.91□□□□□ -0.82
UBXN1-217ENST00000534176 COX19Q49B96 90 aa9.91□□□□□ -0.82
UBXN1-217ENST00000534176 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
UBXN1-217ENST00000534176 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
UBXN1-217ENST00000534176 SRRM2Q9UQ35 2752 aaKnown RBP9.91□□□□□ -0.82
UBXN1-217ENST00000534176 FAT1Q14517 4588 aa9.9□□□□□ -0.82
UBXN1-217ENST00000534176 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
UBXN1-217ENST00000534176 F8WDY8 70 aa9.9□□□□□ -0.82
UBXN1-217ENST00000534176 IFITM2Q01629 132 aa9.9□□□□□ -0.82
UBXN1-217ENST00000534176 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.82
UBXN1-217ENST00000534176 Q6ZUT4 128 aa9.89□□□□□ -0.83
UBXN1-217ENST00000534176 Q8N8P6 123 aa9.89□□□□□ -0.83
UBXN1-217ENST00000534176 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
UBXN1-217ENST00000534176 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
UBXN1-217ENST00000534176 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
UBXN1-217ENST00000534176 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
UBXN1-217ENST00000534176 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
UBXN1-217ENST00000534176 PAPPA-AS1Q5QFB9 102 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 C2orf48Q96LS8 159 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 CYSLTR1Q9Y271 337 aa9.88□□□□□ -0.83
UBXN1-217ENST00000534176 COX6A2Q02221 97 aa9.87□□□□□ -0.83
UBXN1-217ENST00000534176 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
UBXN1-217ENST00000534176 Q6ZN92 141 aa9.87□□□□□ -0.83
UBXN1-217ENST00000534176 IGLV4-69A0A075B6H9 119 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 RHEBQ15382 184 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 COMMD7Q86VX2 200 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms