RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 RAB4AP20338 218 aa9.09□□□□□ -0.95
SHARPIN-208ENST00000533948 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
SHARPIN-208ENST00000533948 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
SHARPIN-208ENST00000533948 F8W036 122 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 H7C423 109 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 FGF6P10767 208 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 RPS10P46783 165 aaKnown RBP9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 NUP35Q8NFH5 326 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 ST20Q9HBF5 79 aa9.08□□□□□ -0.96
SHARPIN-208ENST00000533948 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 PPP1R2P9O14990 202 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 TSHBP01222 138 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 SLPIP03973 132 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 RIGQ13278 110 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
SHARPIN-208ENST00000533948 ESDP10768 282 aa9.06□□□□□ -0.96
SHARPIN-208ENST00000533948 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
SHARPIN-208ENST00000533948 TMEM242Q9NWH2 141 aa9.06□□□□□ -0.96
SHARPIN-208ENST00000533948 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 PHOX2AO14813 284 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 MT-ND4LP03901 98 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 ADCYAP1P18509 176 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 BTF3L4Q96K17 158 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
SHARPIN-208ENST00000533948 TRBV27A0A0K0K1C4 114 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 NAT8BQ9UHF3 227 aa9.04□□□□□ -0.96
SHARPIN-208ENST00000533948 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
SHARPIN-208ENST00000533948 CAMPP49913 170 aa9.03□□□□□ -0.96
SHARPIN-208ENST00000533948 OR5A1Q8NGJ0 315 aa9.03□□□□□ -0.96
SHARPIN-208ENST00000533948 FCER1GP30273 86 aa9.02□□□□□ -0.97
SHARPIN-208ENST00000533948 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
SHARPIN-208ENST00000533948 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
SHARPIN-208ENST00000533948 NRACQ8N912 160 aa9.02□□□□□ -0.97
SHARPIN-208ENST00000533948 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 C7orf77A4D0Y5 90 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 VCYO14598 125 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 COX6A2Q02221 97 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 FOXI1Q12951 378 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 MRPL52Q86TS9 123 aaKnown RBP9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
SHARPIN-208ENST00000533948 PPP1R17O96001 155 aa9□□□□□ -0.97
SHARPIN-208ENST00000533948 XCL1P47992 114 aa9□□□□□ -0.97
SHARPIN-208ENST00000533948 SUMO2P61956 95 aaKnown RBP9□□□□□ -0.97
SHARPIN-208ENST00000533948 NDUFA5Q16718 116 aa9□□□□□ -0.97
SHARPIN-208ENST00000533948 CDC42SE2Q9NRR3 84 aa9□□□□□ -0.97
SHARPIN-208ENST00000533948 CCL25O15444 150 aa8.99□□□□□ -0.97
SHARPIN-208ENST00000533948 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
SHARPIN-208ENST00000533948 CTDSP1Q9GZU7 261 aa8.99□□□□□ -0.97
SHARPIN-208ENST00000533948 GVQW2A0A096LPI5 108 aaPredicted RBP8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 A0A1B0GW15 77 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 RHEBQ15382 184 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 MRPL54Q6P161 138 aaKnown RBP8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 ZNF664Q8N3J9 261 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 STPG4Q8N801 248 aa8.98□□□□□ -0.97
SHARPIN-208ENST00000533948 S100A8P05109 93 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 CKS2P33552 79 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 SS18Q15532 418 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
SHARPIN-208ENST00000533948 TRBV24-1A0A075B6N3 115 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 APOC3P02656 99 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 HBBP68871 147 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 ATP5L2Q7Z4Y8 100 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 SVBPQ8N300 66 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 IMMP2LQ96T52 175 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 UBE2D4Q9Y2X8 147 aa8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
SHARPIN-208ENST00000533948 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 A0A1B0GXF2 115 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 SLC7A5P1Q8MH63 180 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 C20orf78Q9BR46 151 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 LPAP08519 4548 aa8.95□□□□□ -0.98
SHARPIN-208ENST00000533948 D6R8Y8 96 aa8.94□□□□□ -0.98
SHARPIN-208ENST00000533948 SNAPINO95295 136 aa8.94□□□□□ -0.98
SHARPIN-208ENST00000533948 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
SHARPIN-208ENST00000533948 S100PP25815 95 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms