RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 BTF3L4Q96K17 158 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
UBXN1-216ENST00000533908 A0A1W2PNN7 141 aa11.12□□□□□ -0.63
UBXN1-216ENST00000533908 GATCO43716 136 aaKnown RBP11.12□□□□□ -0.63
UBXN1-216ENST00000533908 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
UBXN1-216ENST00000533908 CD164L2Q6UWJ8 174 aa11.12□□□□□ -0.63
UBXN1-216ENST00000533908 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
UBXN1-216ENST00000533908 SS18Q15532 418 aa11.11□□□□□ -0.63
UBXN1-216ENST00000533908 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
UBXN1-216ENST00000533908 ZNF664Q8N3J9 261 aa11.1□□□□□ -0.63
UBXN1-216ENST00000533908 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
UBXN1-216ENST00000533908 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 A8MWL6 223 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
UBXN1-216ENST00000533908 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 FAM231DQ6ZW35 169 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
UBXN1-216ENST00000533908 CAMPP49913 170 aa11.08□□□□□ -0.64
UBXN1-216ENST00000533908 SLC51BQ86UW2 128 aa11.08□□□□□ -0.64
UBXN1-216ENST00000533908 TRBV27A0A0K0K1C4 114 aa11.07□□□□□ -0.64
UBXN1-216ENST00000533908 RAB4AP20338 218 aa11.07□□□□□ -0.64
UBXN1-216ENST00000533908 PKIGQ9Y2B9 76 aa11.07□□□□□ -0.64
UBXN1-216ENST00000533908 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
UBXN1-216ENST00000533908 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
UBXN1-216ENST00000533908 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
UBXN1-216ENST00000533908 C7orf77A4D0Y5 90 aa11.05□□□□□ -0.64
UBXN1-216ENST00000533908 TMEM250H0YL14 139 aa11.05□□□□□ -0.64
UBXN1-216ENST00000533908 RNASE13Q5GAN3 156 aaKnown RBP11.05□□□□□ -0.64
UBXN1-216ENST00000533908 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
UBXN1-216ENST00000533908 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
UBXN1-216ENST00000533908 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
UBXN1-216ENST00000533908 C9orf116Q5BN46 136 aaPredicted RBP11.04□□□□□ -0.64
UBXN1-216ENST00000533908 CT83Q5H943 113 aa11.04□□□□□ -0.64
UBXN1-216ENST00000533908 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
UBXN1-216ENST00000533908 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
UBXN1-216ENST00000533908 LPAP08519 4548 aa11.04□□□□□ -0.64
UBXN1-216ENST00000533908 A0A1B0GUT8 65 aa11.03□□□□□ -0.64
UBXN1-216ENST00000533908 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
UBXN1-216ENST00000533908 C1orf196B1AJZ1 125 aa11.03□□□□□ -0.64
UBXN1-216ENST00000533908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.03□□□□□ -0.64
UBXN1-216ENST00000533908 COX7A2LO14548 114 aa11.03□□□□□ -0.64
UBXN1-216ENST00000533908 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
UBXN1-216ENST00000533908 CEBPGP53567 150 aa11.02□□□□□ -0.65
UBXN1-216ENST00000533908 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
UBXN1-216ENST00000533908 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
UBXN1-216ENST00000533908 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
UBXN1-216ENST00000533908 CAMK2N2Q96S95 79 aa11.02□□□□□ -0.65
UBXN1-216ENST00000533908 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.65
UBXN1-216ENST00000533908 VCYO14598 125 aa11.01□□□□□ -0.65
UBXN1-216ENST00000533908 APOMO95445 188 aa11.01□□□□□ -0.65
UBXN1-216ENST00000533908 MALP21145 153 aa11.01□□□□□ -0.65
UBXN1-216ENST00000533908 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
UBXN1-216ENST00000533908 NRACQ8N912 160 aa11.01□□□□□ -0.65
UBXN1-216ENST00000533908 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
UBXN1-216ENST00000533908 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
UBXN1-216ENST00000533908 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
UBXN1-216ENST00000533908 LINC01551Q86U37 167 aa11□□□□□ -0.65
UBXN1-216ENST00000533908 C2orf48Q96LS8 159 aa11□□□□□ -0.65
UBXN1-216ENST00000533908 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
UBXN1-216ENST00000533908 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
UBXN1-216ENST00000533908 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
UBXN1-216ENST00000533908 MT-ND6P03923 174 aa10.98□□□□□ -0.65
UBXN1-216ENST00000533908 FCER1GP30273 86 aa10.98□□□□□ -0.65
UBXN1-216ENST00000533908 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
UBXN1-216ENST00000533908 Q6ZUT4 128 aa10.98□□□□□ -0.65
UBXN1-216ENST00000533908 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
UBXN1-216ENST00000533908 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
UBXN1-216ENST00000533908 BLOC1S1P78537 153 aa10.97□□□□□ -0.65
UBXN1-216ENST00000533908 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
UBXN1-216ENST00000533908 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
UBXN1-216ENST00000533908 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
UBXN1-216ENST00000533908 V9GYV3 84 aa10.96□□□□□ -0.65
UBXN1-216ENST00000533908 SPAG11BQ08648 103 aa10.95□□□□□ -0.66
UBXN1-216ENST00000533908 RNF151Q2KHN1 245 aa10.95□□□□□ -0.66
UBXN1-216ENST00000533908 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
UBXN1-216ENST00000533908 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
UBXN1-216ENST00000533908 RIGQ13278 110 aa10.94□□□□□ -0.66
UBXN1-216ENST00000533908 MRPL51Q4U2R6 128 aaKnown RBP10.94□□□□□ -0.66
UBXN1-216ENST00000533908 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
UBXN1-216ENST00000533908 ZNF727A8MUV8 499 aa10.93□□□□□ -0.66
UBXN1-216ENST00000533908 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
UBXN1-216ENST00000533908 SRP19P09132 144 aaKnown RBP10.93□□□□□ -0.66
UBXN1-216ENST00000533908 RPL39P62891 51 aaKnown RBP10.93□□□□□ -0.66
UBXN1-216ENST00000533908 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
UBXN1-216ENST00000533908 IGHV3OR16-9A0A0B4J2B5 98 aa10.92□□□□□ -0.66
UBXN1-216ENST00000533908 FAM104BQ5XKR9 115 aa10.92□□□□□ -0.66
UBXN1-216ENST00000533908 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
UBXN1-216ENST00000533908 EIF5A2Q9GZV4 153 aaKnown RBP10.92□□□□□ -0.66
UBXN1-216ENST00000533908 MRPL35Q9NZE8 188 aaKnown RBP10.92□□□□□ -0.66
UBXN1-216ENST00000533908 PPP1R17O96001 155 aa10.91□□□□□ -0.66
UBXN1-216ENST00000533908 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
UBXN1-216ENST00000533908 OR10D4PQ8NGN7 298 aa10.91□□□□□ -0.66
UBXN1-216ENST00000533908 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
UBXN1-216ENST00000533908 ORAOV1Q8WV07 137 aa10.9□□□□□ -0.66
UBXN1-216ENST00000533908 DIRC1Q969H9 104 aa10.9□□□□□ -0.66
UBXN1-216ENST00000533908 TRBV24-1A0A075B6N3 115 aa10.89□□□□□ -0.67
UBXN1-216ENST00000533908 A0A087WZ39 114 aa10.89□□□□□ -0.67
UBXN1-216ENST00000533908 PPP1R2P9O14990 202 aa10.89□□□□□ -0.67
UBXN1-216ENST00000533908 H0Y9J4 135 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms