RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PEA15Q15121 130 aa9.86□□□□□ -0.83
CPSF1-211ENST00000533492 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
CPSF1-211ENST00000533492 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 CCL25O15444 150 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 OXTP01178 125 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 FCER1GP30273 86 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 FOXI1Q12951 378 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 SS18Q15532 418 aa9.85□□□□□ -0.83
CPSF1-211ENST00000533492 A0A087WYN8 130 aa9.84□□□□□ -0.83
CPSF1-211ENST00000533492 COX6A2Q02221 97 aa9.84□□□□□ -0.83
CPSF1-211ENST00000533492 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
CPSF1-211ENST00000533492 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
CPSF1-211ENST00000533492 GVQW2A0A096LPI5 108 aaPredicted RBP9.83□□□□□ -0.84
CPSF1-211ENST00000533492 C9JQL5 133 aa9.83□□□□□ -0.84
CPSF1-211ENST00000533492 SUMO2P61956 95 aaKnown RBP9.83□□□□□ -0.84
CPSF1-211ENST00000533492 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
CPSF1-211ENST00000533492 ZNF664Q8N3J9 261 aa9.83□□□□□ -0.84
CPSF1-211ENST00000533492 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
CPSF1-211ENST00000533492 KIR2DL4Q99706 377 aa9.83□□□□□ -0.84
CPSF1-211ENST00000533492 IGHV1-58A0A0C4DH39 117 aa9.82□□□□□ -0.84
CPSF1-211ENST00000533492 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
CPSF1-211ENST00000533492 CAMPP49913 170 aa9.82□□□□□ -0.84
CPSF1-211ENST00000533492 SMDT1Q9H4I9 107 aa9.82□□□□□ -0.84
CPSF1-211ENST00000533492 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 SMIM27A0A1W2PRY6 76 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 SRSF3P84103 164 aaKnown RBP9.81□□□□□ -0.84
CPSF1-211ENST00000533492 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
CPSF1-211ENST00000533492 FAM104BQ5XKR9 115 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 NRACQ8N912 160 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
CPSF1-211ENST00000533492 A0A1B0GW15 77 aa9.8□□□□□ -0.84
CPSF1-211ENST00000533492 HNRNPA3P51991 378 aaKnown RBP9.8□□□□□ -0.84
CPSF1-211ENST00000533492 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
CPSF1-211ENST00000533492 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 CKS2P33552 79 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 TMEM18Q96B42 140 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
CPSF1-211ENST00000533492 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
CPSF1-211ENST00000533492 C1orf196B1AJZ1 125 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 S100A8P05109 93 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 SERTAD4-AS1Q5TG53 156 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
CPSF1-211ENST00000533492 LRP1Q07954 4544 aaKnown RBP9.78□□□□□ -0.84
CPSF1-211ENST00000533492 F8W036 122 aa9.77□□□□□ -0.85
CPSF1-211ENST00000533492 MALP21145 153 aa9.77□□□□□ -0.85
CPSF1-211ENST00000533492 MRPL54Q6P161 138 aaKnown RBP9.77□□□□□ -0.85
CPSF1-211ENST00000533492 STPG4Q8N801 248 aa9.77□□□□□ -0.85
CPSF1-211ENST00000533492 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
CPSF1-211ENST00000533492 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
CPSF1-211ENST00000533492 TRBV24-1A0A075B6N3 115 aa9.76□□□□□ -0.85
CPSF1-211ENST00000533492 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
CPSF1-211ENST00000533492 TCAPO15273 167 aa9.76□□□□□ -0.85
CPSF1-211ENST00000533492 HBBP68871 147 aa9.76□□□□□ -0.85
CPSF1-211ENST00000533492 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
CPSF1-211ENST00000533492 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
CPSF1-211ENST00000533492 A0A096LNI7 61 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 COX7A2LO14548 114 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 PHOX2AO14813 284 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 TNFRSF6BO95407 300 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 Q6ZRU5 148 aa9.75□□□□□ -0.85
CPSF1-211ENST00000533492 D6R8Y8 96 aa9.74□□□□□ -0.85
CPSF1-211ENST00000533492 RPL32P62910 135 aaKnown RBP9.74□□□□□ -0.85
CPSF1-211ENST00000533492 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
CPSF1-211ENST00000533492 Q6ZUT4 128 aa9.73□□□□□ -0.85
CPSF1-211ENST00000533492 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
CPSF1-211ENST00000533492 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
CPSF1-211ENST00000533492 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
CPSF1-211ENST00000533492 PPBPP02775 128 aa9.72□□□□□ -0.85
CPSF1-211ENST00000533492 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
CPSF1-211ENST00000533492 A0A1B0GXF2 115 aa9.71□□□□□ -0.86
CPSF1-211ENST00000533492 APOMO95445 188 aa9.71□□□□□ -0.86
CPSF1-211ENST00000533492 NPYP01303 97 aa9.71□□□□□ -0.86
CPSF1-211ENST00000533492 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
CPSF1-211ENST00000533492 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
CPSF1-211ENST00000533492 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
CPSF1-211ENST00000533492 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 RAB5AP20339 215 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 RAB14P61106 215 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
CPSF1-211ENST00000533492 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
CPSF1-211ENST00000533492 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
CPSF1-211ENST00000533492 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
CPSF1-211ENST00000533492 PRELID3AQ96N28 172 aa9.67□□□□□ -0.86
CPSF1-211ENST00000533492 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-211ENST00000533492 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
CPSF1-211ENST00000533492 IFITM10A6NMD0 228 aa9.66□□□□□ -0.86
CPSF1-211ENST00000533492 MT-ND4LP03901 98 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms