RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
PKP3-209ENST00000533069 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
PKP3-209ENST00000533069 LOC389332A0A1B0GUA5 103 aa11.1□□□□□ -0.63
PKP3-209ENST00000533069 ESDP10768 282 aa11.1□□□□□ -0.63
PKP3-209ENST00000533069 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
PKP3-209ENST00000533069 PKIAP61925 76 aa11.1□□□□□ -0.63
PKP3-209ENST00000533069 COTL1Q14019 142 aa11.1□□□□□ -0.63
PKP3-209ENST00000533069 RMI2Q96E14 147 aa11.1□□□□□ -0.63
PKP3-209ENST00000533069 HSBP1O75506 76 aa11.09□□□□□ -0.63
PKP3-209ENST00000533069 SMAGPQ0VAQ4 97 aa11.09□□□□□ -0.63
PKP3-209ENST00000533069 IQCJQ1A5X6 159 aa11.09□□□□□ -0.63
PKP3-209ENST00000533069 Q8N814 137 aa11.09□□□□□ -0.63
PKP3-209ENST00000533069 APOBP04114 4563 aaKnown RBP11.09□□□□□ -0.63
PKP3-209ENST00000533069 FUSP35637 526 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKP3-209ENST00000533069 NDUFA6P56556 154 aa11.08□□□□□ -0.64
PKP3-209ENST00000533069 RNASEKQ6P5S7 137 aaKnown RBP11.08□□□□□ -0.64
PKP3-209ENST00000533069 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
PKP3-209ENST00000533069 ABCA13Q86UQ4 5058 aa11.07□□□□□ -0.64
PKP3-209ENST00000533069 IGLV5-52A0A0A0MRZ9 124 aa11.07□□□□□ -0.64
PKP3-209ENST00000533069 SERF1AO75920 110 aa11.07□□□□□ -0.64
PKP3-209ENST00000533069 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
PKP3-209ENST00000533069 KLK12Q9UKR0 248 aa11.07□□□□□ -0.64
PKP3-209ENST00000533069 TMEM262E9PQX1 116 aa11.06□□□□□ -0.64
PKP3-209ENST00000533069 GCSHP23434 173 aa11.06□□□□□ -0.64
PKP3-209ENST00000533069 PACRGQ96M98 296 aaPredicted RBP11.06□□□□□ -0.64
PKP3-209ENST00000533069 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
PKP3-209ENST00000533069 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 H7C423 109 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 TSHBP01222 138 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 Q8N1X5 172 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
PKP3-209ENST00000533069 IGKV2D-24A0A075B6R9 120 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 IGHV1-24A0A0C4DH33 117 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 HBDP02042 147 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 AMTP48728 403 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 NTM-AS1Q6ZSK4 140 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 URB1-AS1Q96HZ7 61 aa11.04□□□□□ -0.64
PKP3-209ENST00000533069 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
PKP3-209ENST00000533069 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
PKP3-209ENST00000533069 CRPP02741 224 aa11.03□□□□□ -0.64
PKP3-209ENST00000533069 NPSP0C0P6 89 aa11.03□□□□□ -0.64
PKP3-209ENST00000533069 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
PKP3-209ENST00000533069 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
PKP3-209ENST00000533069 S100A2P29034 98 aa11.02□□□□□ -0.65
PKP3-209ENST00000533069 TMEM243Q9BU79 118 aa11.02□□□□□ -0.65
PKP3-209ENST00000533069 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
PKP3-209ENST00000533069 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
PKP3-209ENST00000533069 LINC00310P59036 64 aa11.01□□□□□ -0.65
PKP3-209ENST00000533069 WFDC2Q14508 124 aa11.01□□□□□ -0.65
PKP3-209ENST00000533069 C20orf203Q8NBC4 194 aa11.01□□□□□ -0.65
PKP3-209ENST00000533069 C1orf43Q9BWL3 253 aa11.01□□□□□ -0.65
PKP3-209ENST00000533069 UBE2L6O14933 153 aa11□□□□□ -0.65
PKP3-209ENST00000533069 SNRPEP62304 92 aaKnown RBP11□□□□□ -0.65
PKP3-209ENST00000533069 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
PKP3-209ENST00000533069 BAALCQ8WXS3 180 aa11□□□□□ -0.65
PKP3-209ENST00000533069 TOMM6Q96B49 74 aa11□□□□□ -0.65
PKP3-209ENST00000533069 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
PKP3-209ENST00000533069 LECT2O14960 151 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 ATP5LO75964 103 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 ZNF25P17030 456 aaPredicted RBP10.99□□□□□ -0.65
PKP3-209ENST00000533069 XGP55808 180 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 RBX1P62877 108 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 GAGE6Q13070 117 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 MIAQ16674 131 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 HIST3H2BBQ8N257 126 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 Q8N976 141 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
PKP3-209ENST00000533069 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
PKP3-209ENST00000533069 MRPL52Q86TS9 123 aaKnown RBP10.98□□□□□ -0.65
PKP3-209ENST00000533069 PRR34Q9NV39 138 aa10.98□□□□□ -0.65
PKP3-209ENST00000533069 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
PKP3-209ENST00000533069 NUPR1O60356 82 aa10.97□□□□□ -0.65
PKP3-209ENST00000533069 ERASQ7Z444 233 aa10.97□□□□□ -0.65
PKP3-209ENST00000533069 TMEM141Q96I45 108 aa10.97□□□□□ -0.65
PKP3-209ENST00000533069 TIMM17AQ99595 171 aa10.97□□□□□ -0.65
PKP3-209ENST00000533069 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
PKP3-209ENST00000533069 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
PKP3-209ENST00000533069 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.95□□□□□ -0.66
PKP3-209ENST00000533069 A0A096LNJ9 63 aa10.95□□□□□ -0.66
PKP3-209ENST00000533069 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.95□□□□□ -0.66
PKP3-209ENST00000533069 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
PKP3-209ENST00000533069 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
PKP3-209ENST00000533069 SCGB3A1Q96QR1 104 aa10.95□□□□□ -0.66
PKP3-209ENST00000533069 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 HIST1H2BLQ99880 126 aa10.94□□□□□ -0.66
PKP3-209ENST00000533069 FGF6P10767 208 aa10.93□□□□□ -0.66
PKP3-209ENST00000533069 AKR1D1P51857 326 aa10.93□□□□□ -0.66
PKP3-209ENST00000533069 MRPS36P82909 103 aaKnown RBP10.93□□□□□ -0.66
PKP3-209ENST00000533069 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
PKP3-209ENST00000533069 Q6ZN92 141 aa10.93□□□□□ -0.66
PKP3-209ENST00000533069 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms