RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
CPSF1-205ENST00000531042 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
CPSF1-205ENST00000531042 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
CPSF1-205ENST00000531042 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
CPSF1-205ENST00000531042 SNAPINO95295 136 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 ESDP10768 282 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 BTF3L4Q96K17 158 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
CPSF1-205ENST00000531042 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 TSHBP01222 138 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 TSKUQ8WUA8 353 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 TMEM191AQ9H0A3 160 aa9.96□□□□□ -0.82
CPSF1-205ENST00000531042 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 HIGD1CA8MV81 97 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 PHOX2AO14813 284 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 XCL1P47992 114 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
CPSF1-205ENST00000531042 UBR4Q5T4S7 5183 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 C9JQL5 133 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 CCL25O15444 150 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 SCO1O75880 301 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 RAB4AP20338 218 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 POLR2KP53803 58 aaKnown RBP9.94□□□□□ -0.82
CPSF1-205ENST00000531042 MRAP2Q96G30 205 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
CPSF1-205ENST00000531042 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
CPSF1-205ENST00000531042 ZNF727A8MUV8 499 aa9.93□□□□□ -0.82
CPSF1-205ENST00000531042 MRPL52Q86TS9 123 aaKnown RBP9.93□□□□□ -0.82
CPSF1-205ENST00000531042 STPG4Q8N801 248 aa9.93□□□□□ -0.82
CPSF1-205ENST00000531042 A0A096LNI7 61 aa9.92□□□□□ -0.82
CPSF1-205ENST00000531042 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
CPSF1-205ENST00000531042 SRP19P09132 144 aaKnown RBP9.92□□□□□ -0.82
CPSF1-205ENST00000531042 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
CPSF1-205ENST00000531042 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
CPSF1-205ENST00000531042 SS18Q15532 418 aa9.91□□□□□ -0.82
CPSF1-205ENST00000531042 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
CPSF1-205ENST00000531042 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
CPSF1-205ENST00000531042 C7orf77A4D0Y5 90 aa9.9□□□□□ -0.82
CPSF1-205ENST00000531042 RIGQ13278 110 aa9.9□□□□□ -0.82
CPSF1-205ENST00000531042 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
CPSF1-205ENST00000531042 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
CPSF1-205ENST00000531042 V9GYV3 84 aa9.9□□□□□ -0.82
CPSF1-205ENST00000531042 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
CPSF1-205ENST00000531042 VCYO14598 125 aa9.89□□□□□ -0.83
CPSF1-205ENST00000531042 RHEBQ15382 184 aa9.89□□□□□ -0.83
CPSF1-205ENST00000531042 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
CPSF1-205ENST00000531042 LINC00474Q9P2X8 69 aa9.89□□□□□ -0.83
CPSF1-205ENST00000531042 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
CPSF1-205ENST00000531042 NRACQ8N912 160 aa9.88□□□□□ -0.83
CPSF1-205ENST00000531042 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
CPSF1-205ENST00000531042 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
CPSF1-205ENST00000531042 PPP1R17O96001 155 aa9.87□□□□□ -0.83
CPSF1-205ENST00000531042 FCER1GP30273 86 aa9.87□□□□□ -0.83
CPSF1-205ENST00000531042 ISOC2Q96AB3 205 aa9.87□□□□□ -0.83
CPSF1-205ENST00000531042 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
CPSF1-205ENST00000531042 SUMO2P61956 95 aaKnown RBP9.86□□□□□ -0.83
CPSF1-205ENST00000531042 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-205ENST00000531042 TMEM241Q24JQ0 296 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 TNXBP22105 4242 aa9.86□□□□□ -0.83
CPSF1-205ENST00000531042 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
CPSF1-205ENST00000531042 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
CPSF1-205ENST00000531042 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
CPSF1-205ENST00000531042 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
CPSF1-205ENST00000531042 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
CPSF1-205ENST00000531042 CAMPP49913 170 aa9.84□□□□□ -0.83
CPSF1-205ENST00000531042 MRPL51Q4U2R6 128 aaKnown RBP9.84□□□□□ -0.83
CPSF1-205ENST00000531042 FAM104BQ5XKR9 115 aa9.84□□□□□ -0.83
CPSF1-205ENST00000531042 LINC01600Q96MT4 127 aa9.84□□□□□ -0.83
CPSF1-205ENST00000531042 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
CPSF1-205ENST00000531042 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
CPSF1-205ENST00000531042 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
CPSF1-205ENST00000531042 COX7A2LO14548 114 aa9.83□□□□□ -0.84
CPSF1-205ENST00000531042 MALP21145 153 aa9.83□□□□□ -0.84
CPSF1-205ENST00000531042 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
CPSF1-205ENST00000531042 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
CPSF1-205ENST00000531042 ADIRFQ15847 76 aa9.82□□□□□ -0.84
CPSF1-205ENST00000531042 CBLN2Q8IUK8 224 aa9.82□□□□□ -0.84
CPSF1-205ENST00000531042 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
CPSF1-205ENST00000531042 TMA7Q9Y2S6 64 aaKnown RBP9.82□□□□□ -0.84
CPSF1-205ENST00000531042 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 Q6ZUT4 128 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 C20orf78Q9BR46 151 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
CPSF1-205ENST00000531042 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms