RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
TRIM3-209ENST00000529529 CCL25O15444 150 aa10.23□□□□□ -0.77
TRIM3-209ENST00000529529 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
TRIM3-209ENST00000529529 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
TRIM3-209ENST00000529529 SS18Q15532 418 aa10.22□□□□□ -0.77
TRIM3-209ENST00000529529 Q6ZRU5 148 aa10.22□□□□□ -0.77
TRIM3-209ENST00000529529 AMN1Q8IY45 258 aa10.22□□□□□ -0.77
TRIM3-209ENST00000529529 TRBV27A0A0K0K1C4 114 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 RIGQ13278 110 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 NUP35Q8NFH5 326 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 C7orf33Q8WU49 177 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 V9GYV3 84 aa10.21□□□□□ -0.77
TRIM3-209ENST00000529529 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 SMKR1H3BMG3 65 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 VCYO14598 125 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 PHOX2AO14813 284 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 STPG4Q8N801 248 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 LINC00526Q96FQ7 95 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 PLA2G2DQ9UNK4 145 aa10.2□□□□□ -0.78
TRIM3-209ENST00000529529 FCER1GP30273 86 aa10.19□□□□□ -0.78
TRIM3-209ENST00000529529 MRPL52Q86TS9 123 aaKnown RBP10.19□□□□□ -0.78
TRIM3-209ENST00000529529 A0A096LNI7 61 aa10.18□□□□□ -0.78
TRIM3-209ENST00000529529 C7orf77A4D0Y5 90 aa10.18□□□□□ -0.78
TRIM3-209ENST00000529529 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
TRIM3-209ENST00000529529 ISOC2Q96AB3 205 aa10.18□□□□□ -0.78
TRIM3-209ENST00000529529 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
TRIM3-209ENST00000529529 PPP1R17O96001 155 aa10.17□□□□□ -0.78
TRIM3-209ENST00000529529 MT1HL1P0DM35 61 aa10.17□□□□□ -0.78
TRIM3-209ENST00000529529 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
TRIM3-209ENST00000529529 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
TRIM3-209ENST00000529529 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
TRIM3-209ENST00000529529 HMCN2Q8NDA2 5059 aa10.16□□□□□ -0.78
TRIM3-209ENST00000529529 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
TRIM3-209ENST00000529529 NRACQ8N912 160 aa10.16□□□□□ -0.78
TRIM3-209ENST00000529529 ADIRFQ15847 76 aa10.15□□□□□ -0.78
TRIM3-209ENST00000529529 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
TRIM3-209ENST00000529529 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
TRIM3-209ENST00000529529 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.78
TRIM3-209ENST00000529529 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 C9JQL5 133 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 MALP21145 153 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 CAMPP49913 170 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 KIR2DL4Q99706 377 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 NAT8Q9UHE5 227 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 UBE2D4Q9Y2X8 147 aa10.14□□□□□ -0.79
TRIM3-209ENST00000529529 A0A1B0GVG6 124 aa10.13□□□□□ -0.79
TRIM3-209ENST00000529529 SMIM27A0A1W2PRY6 76 aa10.13□□□□□ -0.79
TRIM3-209ENST00000529529 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
TRIM3-209ENST00000529529 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
TRIM3-209ENST00000529529 COX7A2LO14548 114 aa10.12□□□□□ -0.79
TRIM3-209ENST00000529529 PPP1R2P9O14990 202 aa10.12□□□□□ -0.79
TRIM3-209ENST00000529529 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
TRIM3-209ENST00000529529 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
TRIM3-209ENST00000529529 IGLV4-69A0A075B6H9 119 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 CKS2P33552 79 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 PEA15Q15121 130 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
TRIM3-209ENST00000529529 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
TRIM3-209ENST00000529529 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
TRIM3-209ENST00000529529 TRBV24-1A0A075B6N3 115 aa10.09□□□□□ -0.79
TRIM3-209ENST00000529529 A0A1B0GW15 77 aa10.09□□□□□ -0.79
TRIM3-209ENST00000529529 C5orf38Q86SI9 138 aa10.09□□□□□ -0.79
TRIM3-209ENST00000529529 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
TRIM3-209ENST00000529529 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
TRIM3-209ENST00000529529 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
TRIM3-209ENST00000529529 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
TRIM3-209ENST00000529529 Q6ZUT4 128 aa10.08□□□□□ -0.8
TRIM3-209ENST00000529529 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
TRIM3-209ENST00000529529 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
TRIM3-209ENST00000529529 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
TRIM3-209ENST00000529529 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
TRIM3-209ENST00000529529 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
TRIM3-209ENST00000529529 TCAPO15273 167 aa10.06□□□□□ -0.8
TRIM3-209ENST00000529529 APOMO95445 188 aa10.06□□□□□ -0.8
TRIM3-209ENST00000529529 S100A8P05109 93 aa10.06□□□□□ -0.8
TRIM3-209ENST00000529529 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
TRIM3-209ENST00000529529 C2orf48Q96LS8 159 aa10.06□□□□□ -0.8
TRIM3-209ENST00000529529 D6R8Y8 96 aa10.05□□□□□ -0.8
TRIM3-209ENST00000529529 F8W036 122 aa10.05□□□□□ -0.8
TRIM3-209ENST00000529529 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
TRIM3-209ENST00000529529 Q6ZRP5 223 aa10.05□□□□□ -0.8
TRIM3-209ENST00000529529 A0A1W2PNN7 141 aa10.04□□□□□ -0.8
TRIM3-209ENST00000529529 HBBP68871 147 aa10.04□□□□□ -0.8
TRIM3-209ENST00000529529 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
TRIM3-209ENST00000529529 OPRPNQ99935 248 aaPredicted RBP10.04□□□□□ -0.8
TRIM3-209ENST00000529529 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
TRIM3-209ENST00000529529 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
TRIM3-209ENST00000529529 NPYP01303 97 aa10.03□□□□□ -0.8
TRIM3-209ENST00000529529 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM3-209ENST00000529529 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
TRIM3-209ENST00000529529 A0A1B0GXF2 115 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms