RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PEA15Q15121 130 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 TMEM241Q24JQ0 296 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 Q6ZRU5 148 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 OR5A1Q8NGJ0 315 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
CPSF1-204ENST00000529288 FAM231BA6NCW3 169 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 HIGD1CA8MV81 97 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 CCL25O15444 150 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 FOXI1Q12951 378 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 STPG4Q8N801 248 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
CPSF1-204ENST00000529288 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
CPSF1-204ENST00000529288 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
CPSF1-204ENST00000529288 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
CPSF1-204ENST00000529288 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-204ENST00000529288 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 A0A1B0GUT8 65 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 TSHBP01222 138 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 SS18Q15532 418 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 ADIRFQ15847 76 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 CLLU1Q5K131 121 aa8.2□□□□□ -1.1
CPSF1-204ENST00000529288 A0A096LNI7 61 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 AMN1Q8IY45 258 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
CPSF1-204ENST00000529288 SMIM27A0A1W2PRY6 76 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 ESDP10768 282 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 RAB4AP20338 218 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 FCER1GP30273 86 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 TMEM191AQ9H0A3 160 aa8.18□□□□□ -1.1
CPSF1-204ENST00000529288 C7orf77A4D0Y5 90 aa8.17□□□□□ -1.1
CPSF1-204ENST00000529288 RIGQ13278 110 aa8.17□□□□□ -1.1
CPSF1-204ENST00000529288 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
CPSF1-204ENST00000529288 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
CPSF1-204ENST00000529288 VCYO14598 125 aa8.16□□□□□ -1.1
CPSF1-204ENST00000529288 MALP21145 153 aa8.16□□□□□ -1.1
CPSF1-204ENST00000529288 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
CPSF1-204ENST00000529288 RAB14P61106 215 aa8.16□□□□□ -1.1
CPSF1-204ENST00000529288 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
CPSF1-204ENST00000529288 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
CPSF1-204ENST00000529288 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
CPSF1-204ENST00000529288 CD164L2Q6UWJ8 174 aa8.15□□□□□ -1.1
CPSF1-204ENST00000529288 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
CPSF1-204ENST00000529288 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
CPSF1-204ENST00000529288 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
CPSF1-204ENST00000529288 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
CPSF1-204ENST00000529288 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
CPSF1-204ENST00000529288 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
CPSF1-204ENST00000529288 MRPL52Q86TS9 123 aaKnown RBP8.14□□□□□ -1.11
CPSF1-204ENST00000529288 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
CPSF1-204ENST00000529288 COX7A2LO14548 114 aa8.13□□□□□ -1.11
CPSF1-204ENST00000529288 ADCYAP1P18509 176 aa8.13□□□□□ -1.11
CPSF1-204ENST00000529288 CAMPP49913 170 aa8.13□□□□□ -1.11
CPSF1-204ENST00000529288 KIR2DL4Q99706 377 aa8.13□□□□□ -1.11
CPSF1-204ENST00000529288 A0A1B0GXF2 115 aa8.12□□□□□ -1.11
CPSF1-204ENST00000529288 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
CPSF1-204ENST00000529288 PPP1R17O96001 155 aa8.12□□□□□ -1.11
CPSF1-204ENST00000529288 SUMO2P61956 95 aaKnown RBP8.12□□□□□ -1.11
CPSF1-204ENST00000529288 SMAGPQ0VAQ4 97 aa8.12□□□□□ -1.11
CPSF1-204ENST00000529288 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
CPSF1-204ENST00000529288 ODF1Q14990 250 aa8.11□□□□□ -1.11
CPSF1-204ENST00000529288 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
CPSF1-204ENST00000529288 NRACQ8N912 160 aa8.11□□□□□ -1.11
CPSF1-204ENST00000529288 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
CPSF1-204ENST00000529288 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
CPSF1-204ENST00000529288 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 PTTG1IPP53801 180 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
CPSF1-204ENST00000529288 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 Q6ZUT4 128 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
CPSF1-204ENST00000529288 PPP1R2P9O14990 202 aa8.09□□□□□ -1.11
CPSF1-204ENST00000529288 CKS2P33552 79 aa8.09□□□□□ -1.11
CPSF1-204ENST00000529288 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
CPSF1-204ENST00000529288 MRPL54Q6P161 138 aaKnown RBP8.09□□□□□ -1.11
CPSF1-204ENST00000529288 UQCC3Q6UW78 93 aa8.09□□□□□ -1.11
CPSF1-204ENST00000529288 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.11
CPSF1-204ENST00000529288 Q6ZRP5 223 aa8.09□□□□□ -1.11
CPSF1-204ENST00000529288 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 A0A1B0GW15 77 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 TMEM218A2RU14 115 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 APOMO95445 188 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 HBBP68871 147 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
CPSF1-204ENST00000529288 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
CPSF1-204ENST00000529288 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
CPSF1-204ENST00000529288 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
CPSF1-204ENST00000529288 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
CPSF1-204ENST00000529288 TNXBP22105 4242 aa8.06□□□□□ -1.12
CPSF1-204ENST00000529288 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
CPSF1-204ENST00000529288 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
CPSF1-204ENST00000529288 ATP5L2Q7Z4Y8 100 aa8.06□□□□□ -1.12
CPSF1-204ENST00000529288 ANAPC16Q96DE5 110 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms