RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 RAB4AP20338 218 aa9.7□□□□□ -0.86
CLNS1A-210ENST00000528364 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
CLNS1A-210ENST00000528364 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 CT83Q5H943 113 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 AMN1Q8IY45 258 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 TMEM191AQ9H0A3 160 aa9.69□□□□□ -0.86
CLNS1A-210ENST00000528364 SS18Q15532 418 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 BORCS7Q96B45 105 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
CLNS1A-210ENST00000528364 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
CLNS1A-210ENST00000528364 MRPL52Q86TS9 123 aaKnown RBP9.67□□□□□ -0.86
CLNS1A-210ENST00000528364 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
CLNS1A-210ENST00000528364 hCG_2014768A0A024R1R8 64 aa9.66□□□□□ -0.86
CLNS1A-210ENST00000528364 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
CLNS1A-210ENST00000528364 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
CLNS1A-210ENST00000528364 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
CLNS1A-210ENST00000528364 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
CLNS1A-210ENST00000528364 C7orf77A4D0Y5 90 aa9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 AKAP14Q86UN6 197 aa9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
CLNS1A-210ENST00000528364 IGLV4-69A0A075B6H9 119 aa9.64□□□□□ -0.87
CLNS1A-210ENST00000528364 VCYO14598 125 aa9.64□□□□□ -0.87
CLNS1A-210ENST00000528364 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
CLNS1A-210ENST00000528364 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
CLNS1A-210ENST00000528364 V9GYV3 84 aa9.64□□□□□ -0.87
CLNS1A-210ENST00000528364 LRP2P98164 4655 aa9.63□□□□□ -0.87
CLNS1A-210ENST00000528364 SRSF9Q13242 221 aaKnown RBP eCLIP9.63□□□□□ -0.87
CLNS1A-210ENST00000528364 NRACQ8N912 160 aa9.63□□□□□ -0.87
CLNS1A-210ENST00000528364 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
CLNS1A-210ENST00000528364 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 FCER1GP30273 86 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 CAMPP49913 170 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 PTTG1IPP53801 180 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 RIGQ13278 110 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 SPINK6Q6UWN8 80 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 FAM210AQ96ND0 272 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 UBE2D4Q9Y2X8 147 aa9.62□□□□□ -0.87
CLNS1A-210ENST00000528364 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
CLNS1A-210ENST00000528364 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
CLNS1A-210ENST00000528364 C1orf196B1AJZ1 125 aa9.61□□□□□ -0.87
CLNS1A-210ENST00000528364 MALP21145 153 aa9.61□□□□□ -0.87
CLNS1A-210ENST00000528364 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
CLNS1A-210ENST00000528364 COX7A2LO14548 114 aa9.6□□□□□ -0.87
CLNS1A-210ENST00000528364 SUMO2P61956 95 aaKnown RBP9.6□□□□□ -0.87
CLNS1A-210ENST00000528364 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
CLNS1A-210ENST00000528364 Q6ZRP5 223 aa9.6□□□□□ -0.87
CLNS1A-210ENST00000528364 LOC107984640A0A0U1RRK4 108 aa9.59□□□□□ -0.87
CLNS1A-210ENST00000528364 Q6ZUT4 128 aa9.59□□□□□ -0.87
CLNS1A-210ENST00000528364 ISOC2Q96AB3 205 aa9.59□□□□□ -0.87
CLNS1A-210ENST00000528364 C9JQL5 133 aa9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
CLNS1A-210ENST00000528364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
CLNS1A-210ENST00000528364 REG3GQ6UW15 175 aa9.57□□□□□ -0.88
CLNS1A-210ENST00000528364 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
CLNS1A-210ENST00000528364 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
CLNS1A-210ENST00000528364 NAT8BQ9UHF3 227 aa9.57□□□□□ -0.88
CLNS1A-210ENST00000528364 PPP1R17O96001 155 aa9.56□□□□□ -0.88
CLNS1A-210ENST00000528364 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
CLNS1A-210ENST00000528364 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
CLNS1A-210ENST00000528364 APOMO95445 188 aa9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 ADIRFQ15847 76 aa9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
CLNS1A-210ENST00000528364 SMIM27A0A1W2PRY6 76 aa9.54□□□□□ -0.88
CLNS1A-210ENST00000528364 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
CLNS1A-210ENST00000528364 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
CLNS1A-210ENST00000528364 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
CLNS1A-210ENST00000528364 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
CLNS1A-210ENST00000528364 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 CKS2P33552 79 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 C20orf78Q9BR46 151 aa9.53□□□□□ -0.88
CLNS1A-210ENST00000528364 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
CLNS1A-210ENST00000528364 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
CLNS1A-210ENST00000528364 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
CLNS1A-210ENST00000528364 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
CLNS1A-210ENST00000528364 TCAPO15273 167 aa9.51□□□□□ -0.89
CLNS1A-210ENST00000528364 MT-ND6P03923 174 aa9.51□□□□□ -0.89
CLNS1A-210ENST00000528364 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms