RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CCL25O15444 150 aa7.63□□□□□ -1.19
SSBP3-210ENST00000525990 NDUFS6O75380 124 aaKnown RBP7.63□□□□□ -1.19
SSBP3-210ENST00000525990 RNASE13Q5GAN3 156 aaKnown RBP7.63□□□□□ -1.19
SSBP3-210ENST00000525990 NRACQ8N912 160 aa7.63□□□□□ -1.19
SSBP3-210ENST00000525990 MRAP2Q96G30 205 aa7.63□□□□□ -1.19
SSBP3-210ENST00000525990 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-210ENST00000525990 IGKV2-24A0A0C4DH68 120 aa7.62□□□□□ -1.19
SSBP3-210ENST00000525990 OXTP01178 125 aa7.62□□□□□ -1.19
SSBP3-210ENST00000525990 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-210ENST00000525990 ADIRFQ15847 76 aa7.62□□□□□ -1.19
SSBP3-210ENST00000525990 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
SSBP3-210ENST00000525990 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
SSBP3-210ENST00000525990 A0A096LNI7 61 aa7.61□□□□□ -1.19
SSBP3-210ENST00000525990 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
SSBP3-210ENST00000525990 MRPL51Q4U2R6 128 aaKnown RBP7.61□□□□□ -1.19
SSBP3-210ENST00000525990 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
SSBP3-210ENST00000525990 CDC42SE2Q9NRR3 84 aa7.61□□□□□ -1.19
SSBP3-210ENST00000525990 C7orf77A4D0Y5 90 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 PHOX2AO14813 284 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 RIGQ13278 110 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 MAJINQ3KP22 176 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 CFAP161Q6P656 301 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 MRPL52Q86TS9 123 aaKnown RBP7.6□□□□□ -1.19
SSBP3-210ENST00000525990 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
SSBP3-210ENST00000525990 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 CAMPP49913 170 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
SSBP3-210ENST00000525990 FAM74A3Q4VXF1 159 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 ZNF664Q8N3J9 261 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 NAT8Q9UHE5 227 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 NAT8BQ9UHF3 227 aa7.59□□□□□ -1.19
SSBP3-210ENST00000525990 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 FCER1GP30273 86 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 MRPL54Q6P161 138 aaKnown RBP7.58□□□□□ -1.2
SSBP3-210ENST00000525990 Q6ZUT4 128 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 STPG4Q8N801 248 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 UBE2D4Q9Y2X8 147 aa7.58□□□□□ -1.2
SSBP3-210ENST00000525990 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
SSBP3-210ENST00000525990 VCYO14598 125 aa7.57□□□□□ -1.2
SSBP3-210ENST00000525990 SS18Q15532 418 aa7.57□□□□□ -1.2
SSBP3-210ENST00000525990 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
SSBP3-210ENST00000525990 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
SSBP3-210ENST00000525990 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
SSBP3-210ENST00000525990 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
SSBP3-210ENST00000525990 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
SSBP3-210ENST00000525990 PEA15Q15121 130 aa7.55□□□□□ -1.2
SSBP3-210ENST00000525990 OPRPNQ99935 248 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-210ENST00000525990 IGLV4-69A0A075B6H9 119 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 D6R8Y8 96 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 NPYP01303 97 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 CKS2P33552 79 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 C5orf38Q86SI9 138 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
SSBP3-210ENST00000525990 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
SSBP3-210ENST00000525990 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
SSBP3-210ENST00000525990 ODF1Q14990 250 aa7.53□□□□□ -1.2
SSBP3-210ENST00000525990 Q6ZRU5 148 aa7.53□□□□□ -1.2
SSBP3-210ENST00000525990 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
SSBP3-210ENST00000525990 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
SSBP3-210ENST00000525990 CSDC2Q9Y534 153 aaKnown RBP7.53□□□□□ -1.2
SSBP3-210ENST00000525990 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.2
SSBP3-210ENST00000525990 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 COX7A2LO14548 114 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 PPP1R2P9O14990 202 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 TCAPO15273 167 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 PPP1R17O96001 155 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 HBBP68871 147 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
SSBP3-210ENST00000525990 A0A0J9YXV3 536 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 LINC00862A6NCI5 91 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 MALP21145 153 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 GAGE2BQ13066 116 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
SSBP3-210ENST00000525990 A0A1B0GW15 77 aa7.5□□□□□ -1.21
SSBP3-210ENST00000525990 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
SSBP3-210ENST00000525990 RPL32P62910 135 aaKnown RBP7.5□□□□□ -1.21
SSBP3-210ENST00000525990 SMDT1Q9H4I9 107 aa7.5□□□□□ -1.21
SSBP3-210ENST00000525990 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
SSBP3-210ENST00000525990 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
SSBP3-210ENST00000525990 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
SSBP3-210ENST00000525990 F8W036 122 aa7.48□□□□□ -1.21
SSBP3-210ENST00000525990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-210ENST00000525990 SPAG11BQ08648 103 aa7.48□□□□□ -1.21
SSBP3-210ENST00000525990 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
SSBP3-210ENST00000525990 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 APOMO95445 188 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 RPL18AQ02543 176 aaKnown RBP7.47□□□□□ -1.21
SSBP3-210ENST00000525990 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 LINC00474Q9P2X8 69 aa7.47□□□□□ -1.21
SSBP3-210ENST00000525990 LOC389332A0A1B0GUA5 103 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms