RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 BVES-AS1Q5T3Y7 98 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 C6orf201Q7Z4U5 140 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 VSTM2AQ8TAG5 236 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 OR4C12Q96R67 309 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 AMELYQ99218 206 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 LINC00470Q9BZP3 86 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 RPRMQ9NS64 109 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 MCM3APO60318 1980 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 CASP8AP2Q9UKL3 1982 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 TRAV10A0A0B4J240 114 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 A0A1W2PPM0 123 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 hDV103S1A0JD37 113 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 F2Z2F3 143 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 PLXNA2O75051 1894 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 LEPROTL1O95214 131 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 PPYP01298 95 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 FCER1GP30273 86 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 EDDM3BP56851 147 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 CHD3Q12873 2000 aaKnown RBP1.7□□□□□ -2.14
CSDE1-211ENST00000525970 FXYD3Q14802 87 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 LINC01590Q5TEZ4 76 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 TEX29Q8N6K0 151 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 C4orf3Q8WVX3 66 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 NPVFQ9HCQ7 196 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 SPANXCQ9NY87 97 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 BOKQ9UMX3 212 aaPredicted RBP1.7□□□□□ -2.14
CSDE1-211ENST00000525970 TANC2Q9HCD6 1990 aa1.7□□□□□ -2.14
CSDE1-211ENST00000525970 TRAV13-1A0A0B4J241 112 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 SPAARA0A1B0GVQ0 90 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 SYS1-DBNDD2H3BUS1 97 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 H3BVH4 76 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 YPEL1O60688 119 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 KLF7O75840 302 aaPredicted RBP1.69□□□□□ -2.14
CSDE1-211ENST00000525970 SNCGO76070 127 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 SCTP09683 121 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 ARL14EPLP0DKL9 152 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 QRFPP83859 136 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 TFF3Q07654 80 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 Q8TAT8 98 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 PP6455Q8WZ26 134 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 LSM10Q969L4 123 aaKnown RBP1.69□□□□□ -2.14
CSDE1-211ENST00000525970 SPTSSAQ969W0 71 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 PRELID3AQ96N28 172 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 ERG28Q9UKR5 140 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 PTPRDP23468 1912 aa1.69□□□□□ -2.14
CSDE1-211ENST00000525970 LOC110117498A0A087WWA1 95 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 F8W1H4 67 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 H0YGG7 62 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 H3BMG7 143 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 ERC2-IT1O76042 136 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 TNFP01375 233 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 COX8AP10176 69 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 GCHFRP30047 84 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 ZNF137PP52743 207 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 MRPS36P82909 103 aaKnown RBP1.68□□□□□ -2.14
CSDE1-211ENST00000525970 CATR1Q13166 79 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 PIGYQ3MUY2 71 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 SPINK9Q5DT21 86 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 ZNF818PQ6ZRF7 136 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 OR5AS1Q8N127 324 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 TTC9CQ8N5M4 171 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 C18orf32Q8TCD1 76 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 TMEM167BQ9NRX6 74 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 ARFGEF3Q5TH69 2177 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 POLEQ07864 2286 aa1.68□□□□□ -2.14
CSDE1-211ENST00000525970 HEATR1Q9H583 2144 aaKnown RBP1.67□□□□□ -2.14
CSDE1-211ENST00000525970 TNRC6AQ8NDV7 1962 aaKnown RBP1.67□□□□□ -2.14
CSDE1-211ENST00000525970 IGHV1-24A0A0C4DH33 117 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 LOC107984156A0A0G2JMH3 177 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 TMEM189A5PLL7 270 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 TMEM262E9PQX1 116 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 M0R135 149 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 CCL16O15467 120 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 IFITM1P13164 125 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 FOXA3P55318 350 aaPredicted RBP1.67□□□□□ -2.14
CSDE1-211ENST00000525970 UBE2L3P68036 154 aaKnown RBP1.67□□□□□ -2.14
CSDE1-211ENST00000525970 DEFB110Q30KQ9 67 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 ETDBQ3ZM63 59 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 NMSQ5H8A3 153 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 ARL17AQ8IVW1 177 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.67□□□□□ -2.14
CSDE1-211ENST00000525970 RABAC1Q9UI14 185 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 KIAA1549LQ6ZVL6 1849 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 FREM3P0C091 2139 aa1.67□□□□□ -2.14
CSDE1-211ENST00000525970 CXorf51AA0A1B0GTR3 108 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 SMIM27A0A1W2PRY6 76 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 M0R2N4 97 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 IFI6P09912 130 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 HMGA1P17096 107 aaKnown RBP1.66□□□□□ -2.14
CSDE1-211ENST00000525970 EVI2AP22794 236 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 CRYGSP22914 178 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 PLGLB1Q02325 96 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 WFDC2Q14508 124 aa1.66□□□□□ -2.14
CSDE1-211ENST00000525970 MEIG1Q5JSS6 88 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms