RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 LOC107984640A0A0U1RRK4 108 aa15.92■□□□□ 0.14
PVT1-219ENST00000523427 BCL2P10415 239 aa15.92■□□□□ 0.14
PVT1-219ENST00000523427 TEX261Q6UWH6 196 aa15.92■□□□□ 0.14
PVT1-219ENST00000523427 CD164L2Q6UWJ8 174 aa15.92■□□□□ 0.14
PVT1-219ENST00000523427 IGLV4-69A0A075B6H9 119 aa15.91■□□□□ 0.14
PVT1-219ENST00000523427 MT-ND6P03923 174 aa15.91■□□□□ 0.14
PVT1-219ENST00000523427 MRAP2Q96G30 205 aa15.91■□□□□ 0.14
PVT1-219ENST00000523427 PSORS1C2Q9UIG4 136 aa15.91■□□□□ 0.14
PVT1-219ENST00000523427 K7EN84 100 aa15.9■□□□□ 0.14
PVT1-219ENST00000523427 TSHBP01222 138 aa15.9■□□□□ 0.14
PVT1-219ENST00000523427 MALP21145 153 aa15.9■□□□□ 0.14
PVT1-219ENST00000523427 EIF5AL1Q6IS14 154 aaKnown RBP15.9■□□□□ 0.14
PVT1-219ENST00000523427 OCC1Q8TAD7 63 aa15.9■□□□□ 0.14
PVT1-219ENST00000523427 ESDP10768 282 aa15.89■□□□□ 0.13
PVT1-219ENST00000523427 ISOC2Q96AB3 205 aa15.89■□□□□ 0.13
PVT1-219ENST00000523427 CDC42SE2Q9NRR3 84 aa15.89■□□□□ 0.13
PVT1-219ENST00000523427 C1orf137Q5JT78 98 aa15.88■□□□□ 0.13
PVT1-219ENST00000523427 ZNF664Q8N3J9 261 aa15.88■□□□□ 0.13
PVT1-219ENST00000523427 ST20Q9HBF5 79 aa15.88■□□□□ 0.13
PVT1-219ENST00000523427 C9orf116Q5BN46 136 aaPredicted RBP15.87■□□□□ 0.13
PVT1-219ENST00000523427 CAMK2N2Q96S95 79 aa15.87■□□□□ 0.13
PVT1-219ENST00000523427 RPL18AQ02543 176 aaKnown RBP15.86■□□□□ 0.13
PVT1-219ENST00000523427 PHF5AQ7RTV0 110 aaKnown RBP15.86■□□□□ 0.13
PVT1-219ENST00000523427 TRBV6-5A0A0K0K1A5 114 aa15.85■□□□□ 0.13
PVT1-219ENST00000523427 COX7A2LO14548 114 aa15.84■□□□□ 0.13
PVT1-219ENST00000523427 GATCO43716 136 aaKnown RBP15.84■□□□□ 0.13
PVT1-219ENST00000523427 RNASE13Q5GAN3 156 aaKnown RBP15.84■□□□□ 0.13
PVT1-219ENST00000523427 PRR26Q8N8Z3 221 aa15.84■□□□□ 0.13
PVT1-219ENST00000523427 NUP35Q8NFH5 326 aa15.84■□□□□ 0.13
PVT1-219ENST00000523427 APOMO95445 188 aa15.83■□□□□ 0.12
PVT1-219ENST00000523427 MRPL52Q86TS9 123 aaKnown RBP15.83■□□□□ 0.12
PVT1-219ENST00000523427 OPRPNQ99935 248 aaPredicted RBP15.83■□□□□ 0.12
PVT1-219ENST00000523427 C7orf77A4D0Y5 90 aa15.82■□□□□ 0.12
PVT1-219ENST00000523427 C5orf38Q86SI9 138 aa15.81■□□□□ 0.12
PVT1-219ENST00000523427 C1orf196B1AJZ1 125 aa15.8■□□□□ 0.12
PVT1-219ENST00000523427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.8■□□□□ 0.12
PVT1-219ENST00000523427 TRAV13-1A0A0B4J241 112 aa15.79■□□□□ 0.12
PVT1-219ENST00000523427 BORCS7Q96B45 105 aa15.79■□□□□ 0.12
PVT1-219ENST00000523427 A8MWL6 223 aa15.78■□□□□ 0.12
PVT1-219ENST00000523427 POLR2KP53803 58 aaKnown RBP15.78■□□□□ 0.12
PVT1-219ENST00000523427 FCER1GP30273 86 aa15.77■□□□□ 0.12
PVT1-219ENST00000523427 DIRC1Q969H9 104 aa15.76■□□□□ 0.11
PVT1-219ENST00000523427 A0A087WZ39 114 aa15.75■□□□□ 0.11
PVT1-219ENST00000523427 TRBV27A0A0K0K1C4 114 aa15.75■□□□□ 0.11
PVT1-219ENST00000523427 SMKR1H3BMG3 65 aa15.75■□□□□ 0.11
PVT1-219ENST00000523427 CEBPGP53567 150 aa15.75■□□□□ 0.11
PVT1-219ENST00000523427 C2orf48Q96LS8 159 aa15.75■□□□□ 0.11
PVT1-219ENST00000523427 IGLV7-43P04211 117 aa15.74■□□□□ 0.11
PVT1-219ENST00000523427 TAGLN2P37802 199 aaKnown RBP15.74■□□□□ 0.11
PVT1-219ENST00000523427 SPAG11BQ08648 103 aa15.74■□□□□ 0.11
PVT1-219ENST00000523427 AMN1Q8IY45 258 aa15.74■□□□□ 0.11
PVT1-219ENST00000523427 RAB4AP20338 218 aa15.73■□□□□ 0.11
PVT1-219ENST00000523427 FAM210AQ96ND0 272 aa15.72■□□□□ 0.11
PVT1-219ENST00000523427 TMEM191AQ9H0A3 160 aa15.72■□□□□ 0.11
PVT1-219ENST00000523427 UBE2D4Q9Y2X8 147 aa15.72■□□□□ 0.11
PVT1-219ENST00000523427 A0A1B0GUT8 65 aa15.71■□□□□ 0.11
PVT1-219ENST00000523427 VCYO14598 125 aa15.71■□□□□ 0.11
PVT1-219ENST00000523427 FAM231DQ6ZW35 169 aa15.71■□□□□ 0.11
PVT1-219ENST00000523427 FAM168BA1KXE4 195 aa15.7■□□□□ 0.1
PVT1-219ENST00000523427 Q6ZUT4 128 aa15.7■□□□□ 0.1
PVT1-219ENST00000523427 KRTAP11-1Q8IUC1 163 aa15.7■□□□□ 0.1
PVT1-219ENST00000523427 HIGD1CA8MV81 97 aa15.69■□□□□ 0.1
PVT1-219ENST00000523427 H0Y9J4 135 aa15.68■□□□□ 0.1
PVT1-219ENST00000523427 SMAGPQ0VAQ4 97 aa15.68■□□□□ 0.1
PVT1-219ENST00000523427 PRR4Q16378 134 aa15.68■□□□□ 0.1
PVT1-219ENST00000523427 FAM19A5Q7Z5A7 132 aaPredicted RBP15.67■□□□□ 0.1
PVT1-219ENST00000523427 ORAOV1Q8WV07 137 aa15.67■□□□□ 0.1
PVT1-219ENST00000523427 CSDC2Q9Y534 153 aaKnown RBP15.67■□□□□ 0.1
PVT1-219ENST00000523427 CT83Q5H943 113 aa15.66■□□□□ 0.1
PVT1-219ENST00000523427 SUMO2P61956 95 aaKnown RBP15.65■□□□□ 0.1
PVT1-219ENST00000523427 RNF151Q2KHN1 245 aa15.65■□□□□ 0.1
PVT1-219ENST00000523427 SLC51BQ86UW2 128 aa15.65■□□□□ 0.1
PVT1-219ENST00000523427 TSKUQ8WUA8 353 aa15.65■□□□□ 0.1
PVT1-219ENST00000523427 KIR2DL4Q99706 377 aa15.65■□□□□ 0.1
PVT1-219ENST00000523427 TMEM250H0YL14 139 aa15.64■□□□□ 0.09
PVT1-219ENST00000523427 GAGE2EQ4V326 116 aa15.64■□□□□ 0.09
PVT1-219ENST00000523427 IMMP2LQ96T52 175 aa15.64■□□□□ 0.09
PVT1-219ENST00000523427 GAGE2DQ9UEU5 116 aa15.64■□□□□ 0.09
PVT1-219ENST00000523427 C10orf25Q5T742 122 aa15.63■□□□□ 0.09
PVT1-219ENST00000523427 NRACQ8N912 160 aa15.63■□□□□ 0.09
PVT1-219ENST00000523427 OR10D4PQ8NGN7 298 aa15.63■□□□□ 0.09
PVT1-219ENST00000523427 MRPL35Q9NZE8 188 aaKnown RBP15.63■□□□□ 0.09
PVT1-219ENST00000523427 IGLV1-50A0A075B6I6 118 aa15.61■□□□□ 0.09
PVT1-219ENST00000523427 NDUFA1O15239 70 aa15.61■□□□□ 0.09
PVT1-219ENST00000523427 UBE2D1P51668 147 aa15.61■□□□□ 0.09
PVT1-219ENST00000523427 UNQ6190/PRO20217Q6UXQ8 127 aa15.61■□□□□ 0.09
PVT1-219ENST00000523427 RIGQ13278 110 aa15.6■□□□□ 0.09
PVT1-219ENST00000523427 TMEM18Q96B42 140 aa15.6■□□□□ 0.09
PVT1-219ENST00000523427 PPP1R17O96001 155 aa15.59■□□□□ 0.09
PVT1-219ENST00000523427 RPL39P62891 51 aaKnown RBP15.59■□□□□ 0.09
PVT1-219ENST00000523427 UBE2BP63146 152 aa15.59■□□□□ 0.09
PVT1-219ENST00000523427 SMIM7Q9BQ49 75 aa15.59■□□□□ 0.09
PVT1-219ENST00000523427 MUC2Q02817 5179 aa15.59■□□□□ 0.09
PVT1-219ENST00000523427 KRTAP1-4P0C5Y4 121 aa15.58■□□□□ 0.08
PVT1-219ENST00000523427 TIMM21Q9BVV7 248 aa15.58■□□□□ 0.08
PVT1-219ENST00000523427 C6orf48Q9UBA6 75 aa15.58■□□□□ 0.08
PVT1-219ENST00000523427 LINC01551Q86U37 167 aa15.57■□□□□ 0.08
PVT1-219ENST00000523427 M0QXV9 152 aa15.55■□□□□ 0.08
PVT1-219ENST00000523427 MRPL51Q4U2R6 128 aaKnown RBP15.55■□□□□ 0.08
PVT1-219ENST00000523427 OSTCQ9NRP0 149 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms