RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
TRAPPC9-208ENST00000520857 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
TRAPPC9-208ENST00000520857 NDUFA7O95182 113 aa9.36□□□□□ -0.91
TRAPPC9-208ENST00000520857 UBE2L6O14933 153 aa9.36□□□□□ -0.91
TRAPPC9-208ENST00000520857 IGLV1-40P01703 118 aa9.36□□□□□ -0.91
TRAPPC9-208ENST00000520857 UCNP55089 124 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 CFHR3Q02985 330 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 DEFB112Q30KQ8 113 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 PIK3CD-AS1Q5SR53 167 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 COX7A2LO14548 114 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 CRPP02741 224 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 NAV2Q8IVL1 2488 aa9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 MRPL23Q16540 153 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-208ENST00000520857 SLURP1P55000 103 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 LINC00158P58513 81 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 HERVK_113P63121 156 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 RBMY1A1P0DJD3 496 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 RBMY1CP0DJD4 496 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 RBMY1FQ15415 496 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 GNLYP22749 145 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 COX6A2Q02221 97 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 HIST2H2BDQ6DRA6 164 aa9.34□□□□□ -0.91
TRAPPC9-208ENST00000520857 ACYP1P07311 99 aa9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 FAM240AA0A1B0GVK7 77 aa9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 NDUFA1O15239 70 aa9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 LINC00643Q86TS7 51 aa9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 Q8N2B8 174 aa9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 C11orf68Q9H3H3 251 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-208ENST00000520857 AVPP01185 164 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 PSMB8P28062 276 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 C11orf44Q8N8P7 122 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 CITED2Q99967 270 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 FAM110AQ9BQ89 295 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 B4DSR2 109 aa9.32□□□□□ -0.92
TRAPPC9-208ENST00000520857 INAFM2P0DMQ5 153 aa9.31□□□□□ -0.92
TRAPPC9-208ENST00000520857 RNASE1P07998 156 aaKnown RBP9.31□□□□□ -0.92
TRAPPC9-208ENST00000520857 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
TRAPPC9-208ENST00000520857 PFN2P35080 140 aa9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 C10orf105Q8TEF2 133 aa9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 INSP01308 110 aa9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 NRGNQ92686 78 aa9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 ABCA12Q86UK0 2595 aa9.3□□□□□ -0.92
TRAPPC9-208ENST00000520857 PAX4O43316 350 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 TIMM17BO60830 172 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 TIRAPP58753 221 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 LRRK2Q5S007 2527 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 SDIM1Q6ZPB5 146 aa9.29□□□□□ -0.92
TRAPPC9-208ENST00000520857 ATP5G1P05496 136 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 TRGV2A0A075B6R0 118 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 STHQ8IWL8 128 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 EPG5Q9HCE0 2579 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 TRBV7-7A0A0K0K1E9 115 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 C18orf65Q6ZTR6 163 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 MIR7-3HGQ8N6C7 128 aa9.28□□□□□ -0.92
TRAPPC9-208ENST00000520857 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.92
TRAPPC9-208ENST00000520857 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.92
TRAPPC9-208ENST00000520857 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.92
TRAPPC9-208ENST00000520857 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
TRAPPC9-208ENST00000520857 NBL1P41271 181 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 UQCRQO14949 82 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 PEMTQ9UBM1 199 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 TRAV13-2A0A0B4J235 113 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 MALP21145 153 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 ZFYVE26Q68DK2 2539 aa9.26□□□□□ -0.93
TRAPPC9-208ENST00000520857 ANKRD17O75179 2603 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 BRI3O95415 125 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 TRACP01848 142 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 BSNQ9UPA5 3926 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 A0A1B0GX51 115 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 FAM218AQ96MZ4 157 aa9.25□□□□□ -0.93
TRAPPC9-208ENST00000520857 hADV29S1A0JD25 119 aa9.24□□□□□ -0.93
TRAPPC9-208ENST00000520857 LECT2O14960 151 aa9.24□□□□□ -0.93
TRAPPC9-208ENST00000520857 Q6ZTI0 123 aa9.24□□□□□ -0.93
TRAPPC9-208ENST00000520857 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
TRAPPC9-208ENST00000520857 C5orf38Q86SI9 138 aa9.23□□□□□ -0.93
TRAPPC9-208ENST00000520857 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
TRAPPC9-208ENST00000520857 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
TRAPPC9-208ENST00000520857 SLPIP03973 132 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms