RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 A0A1B0GVG6 124 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 SDHAF1A6NFY7 115 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 F2Z2F3 143 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 H7C1H1 209 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 EIF5AP63241 154 aaKnown RBP5.38□□□□□ -1.55
PABPC1-213ENST00000519848 PRR3P79522 188 aaKnown RBP5.38□□□□□ -1.55
PABPC1-213ENST00000519848 RNASE13Q5GAN3 156 aaKnown RBP5.38□□□□□ -1.55
PABPC1-213ENST00000519848 WDR73Q6P4I2 378 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 SLC51BQ86UW2 128 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 TRBV6-5A0A0K0K1A5 114 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 PKIAP61925 76 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 FAM231DQ6ZW35 169 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 LINC01551Q86U37 167 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
PABPC1-213ENST00000519848 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 CCL25O15444 150 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 XCL1P47992 114 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
PABPC1-213ENST00000519848 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 SERTAD4-AS1Q5TG53 156 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 RNASEKQ6P5S7 137 aaKnown RBP5.36□□□□□ -1.55
PABPC1-213ENST00000519848 NRACQ8N912 160 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 V9GYV3 84 aa5.36□□□□□ -1.55
PABPC1-213ENST00000519848 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
PABPC1-213ENST00000519848 APCSP02743 223 aa5.35□□□□□ -1.55
PABPC1-213ENST00000519848 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
PABPC1-213ENST00000519848 RAB4AP20338 218 aa5.35□□□□□ -1.55
PABPC1-213ENST00000519848 Q6ZRU5 148 aa5.35□□□□□ -1.55
PABPC1-213ENST00000519848 Q6ZUT4 128 aa5.35□□□□□ -1.55
PABPC1-213ENST00000519848 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 XKRY2A2RUG3 117 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 HIGD1CA8MV81 97 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 TMEM250H0YL14 139 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 UBE2L6O14933 153 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 CEBPGP53567 150 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 STPG4Q8N801 248 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.55
PABPC1-213ENST00000519848 TRBV27A0A0K0K1C4 114 aa5.33□□□□□ -1.56
PABPC1-213ENST00000519848 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
PABPC1-213ENST00000519848 NDUFS6O75380 124 aaKnown RBP5.33□□□□□ -1.56
PABPC1-213ENST00000519848 CT83Q5H943 113 aa5.33□□□□□ -1.56
PABPC1-213ENST00000519848 EIF5AL1Q6IS14 154 aaKnown RBP5.33□□□□□ -1.56
PABPC1-213ENST00000519848 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
PABPC1-213ENST00000519848 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-213ENST00000519848 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-213ENST00000519848 CDC42SE2Q9NRR3 84 aa5.33□□□□□ -1.56
PABPC1-213ENST00000519848 I3L3M4 83 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
PABPC1-213ENST00000519848 AMMECR1LQ6DCA0 310 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 AKAP14Q86UN6 197 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 NUP35Q8NFH5 326 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 TSKUQ8WUA8 353 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 ISOC2Q96AB3 205 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 LINC01600Q96MT4 127 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 FAM210AQ96ND0 272 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 TMEM191AQ9H0A3 160 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 AP5S1Q9NUS5 200 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
PABPC1-213ENST00000519848 IGLV4-69A0A075B6H9 119 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-213ENST00000519848 A0A0J9YXV3 536 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 A8MWL6 223 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-213ENST00000519848 PMCHP20382 165 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 RPL23P62829 140 aaKnown RBP5.31□□□□□ -1.56
PABPC1-213ENST00000519848 RPL39P62891 51 aaKnown RBP5.31□□□□□ -1.56
PABPC1-213ENST00000519848 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 BIN3Q9NQY0 253 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 LPAP08519 4548 aa5.31□□□□□ -1.56
PABPC1-213ENST00000519848 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 H7C423 109 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 ZNF25P17030 456 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-213ENST00000519848 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 MRPL51Q4U2R6 128 aaKnown RBP5.3□□□□□ -1.56
PABPC1-213ENST00000519848 C10orf25Q5T742 122 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 ST20Q9HBF5 79 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 OSTCQ9NRP0 149 aa5.3□□□□□ -1.56
PABPC1-213ENST00000519848 IGHV1-58A0A0C4DH39 117 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 C7orf77A4D0Y5 90 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 NPYP01303 97 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
PABPC1-213ENST00000519848 CD164L2Q6UWJ8 174 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 C5orf38Q86SI9 138 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 ZNF664Q8N3J9 261 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
PABPC1-213ENST00000519848 A0A1B0GXF2 115 aa5.28□□□□□ -1.56
PABPC1-213ENST00000519848 SMIM27A0A1W2PRY6 76 aa5.28□□□□□ -1.56
PABPC1-213ENST00000519848 CAMPP49913 170 aa5.28□□□□□ -1.56
PABPC1-213ENST00000519848 SUMO2P61956 95 aaKnown RBP5.28□□□□□ -1.56
PABPC1-213ENST00000519848 BLOC1S1P78537 153 aa5.28□□□□□ -1.56
PABPC1-213ENST00000519848 SYCNQ0VAF6 134 aa5.28□□□□□ -1.56
PABPC1-213ENST00000519848 PHF5AQ7RTV0 110 aaKnown RBP5.28□□□□□ -1.56
PABPC1-213ENST00000519848 DPH3Q96FX2 82 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms