RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CHCHD10Q8WYQ3 142 aaPredicted RBP15.91■□□□□ 0.14
PVT1-204ENST00000517525 CSDC2Q9Y534 153 aaKnown RBP15.91■□□□□ 0.14
PVT1-204ENST00000517525 GAGE12HA6NDE8 117 aa15.9■□□□□ 0.14
PVT1-204ENST00000517525 MRPL54Q6P161 138 aaKnown RBP15.9■□□□□ 0.14
PVT1-204ENST00000517525 KIR2DL4Q99706 377 aa15.9■□□□□ 0.14
PVT1-204ENST00000517525 CDC42SE2Q9NRR3 84 aa15.9■□□□□ 0.14
PVT1-204ENST00000517525 PPBPP02775 128 aa15.89■□□□□ 0.13
PVT1-204ENST00000517525 FCER1GP30273 86 aa15.89■□□□□ 0.13
PVT1-204ENST00000517525 CKS2P33552 79 aa15.89■□□□□ 0.13
PVT1-204ENST00000517525 ANAPC16Q96DE5 110 aa15.89■□□□□ 0.13
PVT1-204ENST00000517525 hDV102S1A0JD36 115 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 PHOX2AO14813 284 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 TCAPO15273 167 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 SMAGPQ0VAQ4 97 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 SDIM1Q6ZPB5 146 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 CIRBP-AS1Q8TBR5 109 aa15.88■□□□□ 0.13
PVT1-204ENST00000517525 IGKV3OR2-268A0A0C4DH90 116 aa15.87■□□□□ 0.13
PVT1-204ENST00000517525 MT-ND4LP03901 98 aa15.87■□□□□ 0.13
PVT1-204ENST00000517525 ZNF664Q8N3J9 261 aa15.87■□□□□ 0.13
PVT1-204ENST00000517525 C15orf56Q8N910 161 aa15.87■□□□□ 0.13
PVT1-204ENST00000517525 AP5S1Q9NUS5 200 aa15.87■□□□□ 0.13
PVT1-204ENST00000517525 LINC00959A0A1B0GUT2 108 aa15.86■□□□□ 0.13
PVT1-204ENST00000517525 TNFRSF6BO95407 300 aa15.86■□□□□ 0.13
PVT1-204ENST00000517525 SLPIP03973 132 aa15.86■□□□□ 0.13
PVT1-204ENST00000517525 FOXI1Q12951 378 aa15.86■□□□□ 0.13
PVT1-204ENST00000517525 SRRM2Q9UQ35 2752 aaKnown RBP15.85■□□□□ 0.13
PVT1-204ENST00000517525 LINC00528Q8N1L1 170 aa15.85■□□□□ 0.13
PVT1-204ENST00000517525 TIMM21Q9BVV7 248 aa15.85■□□□□ 0.13
PVT1-204ENST00000517525 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.84■□□□□ 0.13
PVT1-204ENST00000517525 PLA2G1BP04054 148 aaKnown RBP15.84■□□□□ 0.13
PVT1-204ENST00000517525 IFITM2Q01629 132 aa15.84■□□□□ 0.13
PVT1-204ENST00000517525 UQCC3Q6UW78 93 aa15.84■□□□□ 0.13
PVT1-204ENST00000517525 UBE2D4Q9Y2X8 147 aa15.84■□□□□ 0.13
PVT1-204ENST00000517525 D6R8Y8 96 aa15.83■□□□□ 0.12
PVT1-204ENST00000517525 CCL25O15444 150 aa15.83■□□□□ 0.12
PVT1-204ENST00000517525 TMEM18Q96B42 140 aa15.83■□□□□ 0.12
PVT1-204ENST00000517525 SMIM2Q9BVW6 85 aa15.83■□□□□ 0.12
PVT1-204ENST00000517525 GVQW2A0A096LPI5 108 aaPredicted RBP15.82■□□□□ 0.12
PVT1-204ENST00000517525 CIRBPQ14011 172 aaKnown RBP15.82■□□□□ 0.12
PVT1-204ENST00000517525 SS18Q15532 418 aa15.81■□□□□ 0.12
PVT1-204ENST00000517525 IGHV3-64A0A075B6Q5 118 aa15.8■□□□□ 0.12
PVT1-204ENST00000517525 NPYP01303 97 aa15.8■□□□□ 0.12
PVT1-204ENST00000517525 CD164L2Q6UWJ8 174 aa15.8■□□□□ 0.12
PVT1-204ENST00000517525 ORMDL3Q8N138 153 aa15.8■□□□□ 0.12
PVT1-204ENST00000517525 XCL1P47992 114 aa15.79■□□□□ 0.12
PVT1-204ENST00000517525 PRSS47A8MTI9 375 aa15.78■□□□□ 0.12
PVT1-204ENST00000517525 TMEM136Q6ZRR5 245 aa15.78■□□□□ 0.12
PVT1-204ENST00000517525 IMMP2LQ96T52 175 aa15.78■□□□□ 0.12
PVT1-204ENST00000517525 LAMTOR2Q9Y2Q5 125 aa15.78■□□□□ 0.12
PVT1-204ENST00000517525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.78■□□□□ 0.12
PVT1-204ENST00000517525 FLG2Q5D862 2391 aaPredicted RBP15.78■□□□□ 0.12
PVT1-204ENST00000517525 C1orf196B1AJZ1 125 aa15.77■□□□□ 0.12
PVT1-204ENST00000517525 IGHV1-58A0A0C4DH39 117 aa15.76■□□□□ 0.11
PVT1-204ENST00000517525 TMEM218A2RU14 115 aa15.76■□□□□ 0.11
PVT1-204ENST00000517525 PRELID3AQ96N28 172 aa15.76■□□□□ 0.11
PVT1-204ENST00000517525 KRTAP10-4P60372 401 aaPredicted RBP15.75■□□□□ 0.11
PVT1-204ENST00000517525 SPANXA1Q9NS26 97 aa15.75■□□□□ 0.11
PVT1-204ENST00000517525 PANO1I0J062 215 aa15.74■□□□□ 0.11
PVT1-204ENST00000517525 ADCYAP1P18509 176 aa15.74■□□□□ 0.11
PVT1-204ENST00000517525 HIGD2BQ4VC39 106 aa15.74■□□□□ 0.11
PVT1-204ENST00000517525 MRPS36P82909 103 aaKnown RBP15.73■□□□□ 0.11
PVT1-204ENST00000517525 FAM104AQ969W3 186 aa15.73■□□□□ 0.11
PVT1-204ENST00000517525 Q6ZUT4 128 aa15.72■□□□□ 0.11
PVT1-204ENST00000517525 CTDSP1Q9GZU7 261 aa15.72■□□□□ 0.11
PVT1-204ENST00000517525 RPL39P62891 51 aaKnown RBP15.71■□□□□ 0.11
PVT1-204ENST00000517525 SEC11CQ9BY50 192 aa15.71■□□□□ 0.11
PVT1-204ENST00000517525 DMBT1Q9UGM3 2413 aaPredicted RBP15.7■□□□□ 0.1
PVT1-204ENST00000517525 TRAV9-1A0A075B6T8 112 aa15.69■□□□□ 0.1
PVT1-204ENST00000517525 RAB5AP20339 215 aa15.69■□□□□ 0.1
PVT1-204ENST00000517525 SPACA4Q8TDM5 124 aa15.69■□□□□ 0.1
PVT1-204ENST00000517525 MYCBP2O75592 4640 aa15.68■□□□□ 0.1
PVT1-204ENST00000517525 PYGO1Q9Y3Y4 419 aa15.68■□□□□ 0.1
PVT1-204ENST00000517525 TRAV13-1A0A0B4J241 112 aa15.67■□□□□ 0.1
PVT1-204ENST00000517525 COX7A2LO14548 114 aa15.67■□□□□ 0.1
PVT1-204ENST00000517525 RNASE13Q5GAN3 156 aaKnown RBP15.67■□□□□ 0.1
PVT1-204ENST00000517525 MAP1LC3AQ9H492 121 aa15.67■□□□□ 0.1
PVT1-204ENST00000517525 PKIGQ9Y2B9 76 aa15.67■□□□□ 0.1
PVT1-204ENST00000517525 COX6A2Q02221 97 aa15.66■□□□□ 0.1
PVT1-204ENST00000517525 K7EMI3 77 aa15.65■□□□□ 0.1
PVT1-204ENST00000517525 Q8N8P6 123 aa15.65■□□□□ 0.1
PVT1-204ENST00000517525 PLAC8Q9NZF1 115 aa15.65■□□□□ 0.1
PVT1-204ENST00000517525 ZNF561-AS1K7EIQ3 104 aa15.64■□□□□ 0.09
PVT1-204ENST00000517525 HERC1Q15751 4861 aa15.64■□□□□ 0.09
PVT1-204ENST00000517525 C10orf91Q5T1B1 145 aa15.64■□□□□ 0.09
PVT1-204ENST00000517525 PRSS3P2Q8NHM4 247 aa15.64■□□□□ 0.09
PVT1-204ENST00000517525 A0A087WYN8 130 aa15.63■□□□□ 0.09
PVT1-204ENST00000517525 CHTF8P0CG12 524 aa15.63■□□□□ 0.09
PVT1-204ENST00000517525 MALP21145 153 aa15.63■□□□□ 0.09
PVT1-204ENST00000517525 IFI27P40305 119 aaPredicted RBP15.62■□□□□ 0.09
PVT1-204ENST00000517525 RPL37AP61513 92 aaKnown RBP15.62■□□□□ 0.09
PVT1-204ENST00000517525 SYCNQ0VAF6 134 aa15.62■□□□□ 0.09
PVT1-204ENST00000517525 COMMD7Q86VX2 200 aa15.62■□□□□ 0.09
PVT1-204ENST00000517525 CARD19Q96LW7 228 aa15.62■□□□□ 0.09
PVT1-204ENST00000517525 OPRPNQ99935 248 aaPredicted RBP15.62■□□□□ 0.09
PVT1-204ENST00000517525 IGHV3OR16-9A0A0B4J2B5 98 aa15.61■□□□□ 0.09
PVT1-204ENST00000517525 C2orf48Q96LS8 159 aa15.61■□□□□ 0.09
PVT1-204ENST00000517525 LOC389332A0A1B0GUA5 103 aa15.6■□□□□ 0.09
PVT1-204ENST00000517525 APOMO95445 188 aa15.6■□□□□ 0.09
PVT1-204ENST00000517525 LINC00526Q96FQ7 95 aa15.6■□□□□ 0.09
PVT1-204ENST00000517525 DPH3Q96FX2 82 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms