RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ESDP10768 282 aa9.38□□□□□ -0.91
SGCA-211ENST00000514934 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
SGCA-211ENST00000514934 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
SGCA-211ENST00000514934 TSHBP01222 138 aa9.37□□□□□ -0.91
SGCA-211ENST00000514934 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
SGCA-211ENST00000514934 ISOC2Q96AB3 205 aa9.37□□□□□ -0.91
SGCA-211ENST00000514934 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
SGCA-211ENST00000514934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
SGCA-211ENST00000514934 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
SGCA-211ENST00000514934 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
SGCA-211ENST00000514934 RAB4AP20338 218 aa9.36□□□□□ -0.91
SGCA-211ENST00000514934 S100PP25815 95 aa9.36□□□□□ -0.91
SGCA-211ENST00000514934 ADIRFQ15847 76 aa9.36□□□□□ -0.91
SGCA-211ENST00000514934 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
SGCA-211ENST00000514934 H7C423 109 aa9.35□□□□□ -0.91
SGCA-211ENST00000514934 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
SGCA-211ENST00000514934 NUP35Q8NFH5 326 aa9.35□□□□□ -0.91
SGCA-211ENST00000514934 UBE2L6O14933 153 aa9.34□□□□□ -0.91
SGCA-211ENST00000514934 FGF6P10767 208 aa9.34□□□□□ -0.91
SGCA-211ENST00000514934 RAB5AP20339 215 aa9.34□□□□□ -0.91
SGCA-211ENST00000514934 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
SGCA-211ENST00000514934 NRACQ8N912 160 aa9.34□□□□□ -0.91
SGCA-211ENST00000514934 TNXBP22105 4242 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 hDV102S1A0JD36 115 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 GAGE12HA6NDE8 117 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 I3L3M4 83 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 APCSP02743 223 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 S100A6P06703 90 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
SGCA-211ENST00000514934 FOXI1Q12951 378 aa9.32□□□□□ -0.92
SGCA-211ENST00000514934 COX19Q49B96 90 aa9.32□□□□□ -0.92
SGCA-211ENST00000514934 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
SGCA-211ENST00000514934 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
SGCA-211ENST00000514934 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
SGCA-211ENST00000514934 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
SGCA-211ENST00000514934 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
SGCA-211ENST00000514934 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
SGCA-211ENST00000514934 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
SGCA-211ENST00000514934 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
SGCA-211ENST00000514934 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
SGCA-211ENST00000514934 OR5A1Q8NGJ0 315 aa9.3□□□□□ -0.92
SGCA-211ENST00000514934 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
SGCA-211ENST00000514934 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
SGCA-211ENST00000514934 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
SGCA-211ENST00000514934 S100A8P05109 93 aa9.29□□□□□ -0.92
SGCA-211ENST00000514934 PMCHP20382 165 aa9.29□□□□□ -0.92
SGCA-211ENST00000514934 RNASEKQ6P5S7 137 aaKnown RBP9.29□□□□□ -0.92
SGCA-211ENST00000514934 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
SGCA-211ENST00000514934 LINC00959A0A1B0GUT2 108 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 C5orf52A6NGY3 159 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 AKR1D1P51857 326 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
SGCA-211ENST00000514934 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
SGCA-211ENST00000514934 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
SGCA-211ENST00000514934 A0A1B0GXF2 115 aa9.27□□□□□ -0.93
SGCA-211ENST00000514934 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
SGCA-211ENST00000514934 RIGQ13278 110 aa9.27□□□□□ -0.93
SGCA-211ENST00000514934 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
SGCA-211ENST00000514934 FAM104BQ5XKR9 115 aa9.27□□□□□ -0.93
SGCA-211ENST00000514934 A0A087WYN8 130 aa9.26□□□□□ -0.93
SGCA-211ENST00000514934 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
SGCA-211ENST00000514934 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
SGCA-211ENST00000514934 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
SGCA-211ENST00000514934 CCL25O15444 150 aa9.25□□□□□ -0.93
SGCA-211ENST00000514934 SNRPEP62304 92 aaKnown RBP9.25□□□□□ -0.93
SGCA-211ENST00000514934 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
SGCA-211ENST00000514934 UBE2D4Q9Y2X8 147 aa9.25□□□□□ -0.93
SGCA-211ENST00000514934 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
SGCA-211ENST00000514934 J3QL48 77 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 OXTP01178 125 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 XCL1P47992 114 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
SGCA-211ENST00000514934 COX6A2Q02221 97 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 ZNF664Q8N3J9 261 aa9.24□□□□□ -0.93
SGCA-211ENST00000514934 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
SGCA-211ENST00000514934 VCYO14598 125 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 MT-ND6P03923 174 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 CFAP161Q6P656 301 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
SGCA-211ENST00000514934 A0A1B0GW15 77 aa9.22□□□□□ -0.93
SGCA-211ENST00000514934 S100A12P80511 92 aa9.22□□□□□ -0.93
SGCA-211ENST00000514934 FABP9Q0Z7S8 132 aa9.22□□□□□ -0.93
SGCA-211ENST00000514934 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
SGCA-211ENST00000514934 A0A096LNI7 61 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 PPP1R17O96001 155 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 CAMPP49913 170 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 Q6ZUT4 128 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 TMEM101Q96IK0 257 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 C12orf57Q99622 126 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.94
SGCA-211ENST00000514934 GNB1LQ9BYB4 327 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms