RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 SS18Q15532 418 aa14.02□□□□□ -0.17
SMAD1-214ENST00000514831 RNASE7Q9H1E1 156 aaKnown RBP14.02□□□□□ -0.17
SMAD1-214ENST00000514831 BCL2P10415 239 aa14.01□□□□□ -0.17
SMAD1-214ENST00000514831 GAGE2BQ13066 116 aa14.01□□□□□ -0.17
SMAD1-214ENST00000514831 ISOC2Q96AB3 205 aa14.01□□□□□ -0.17
SMAD1-214ENST00000514831 MRAP2Q96G30 205 aa14.01□□□□□ -0.17
SMAD1-214ENST00000514831 K7EN84 100 aa14□□□□□ -0.17
SMAD1-214ENST00000514831 TSHBP01222 138 aa14□□□□□ -0.17
SMAD1-214ENST00000514831 EIF5AL1Q6IS14 154 aaKnown RBP14□□□□□ -0.17
SMAD1-214ENST00000514831 MRPL52Q86TS9 123 aaKnown RBP14□□□□□ -0.17
SMAD1-214ENST00000514831 FAM210AQ96ND0 272 aa14□□□□□ -0.17
SMAD1-214ENST00000514831 CDC42SE2Q9NRR3 84 aa14□□□□□ -0.17
SMAD1-214ENST00000514831 A0A1W2PNN7 141 aa13.99□□□□□ -0.17
SMAD1-214ENST00000514831 PSORS1C2Q9UIG4 136 aa13.99□□□□□ -0.17
SMAD1-214ENST00000514831 IGLV4-69A0A075B6H9 119 aa13.98□□□□□ -0.17
SMAD1-214ENST00000514831 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
SMAD1-214ENST00000514831 TMEM242Q9NWH2 141 aa13.98□□□□□ -0.17
SMAD1-214ENST00000514831 LPAP08519 4548 aa13.98□□□□□ -0.17
SMAD1-214ENST00000514831 NUP35Q8NFH5 326 aa13.97□□□□□ -0.17
SMAD1-214ENST00000514831 APOMO95445 188 aa13.96□□□□□ -0.17
SMAD1-214ENST00000514831 MT-ND6P03923 174 aa13.96□□□□□ -0.17
SMAD1-214ENST00000514831 OCC1Q8TAD7 63 aa13.96□□□□□ -0.17
SMAD1-214ENST00000514831 ST20Q9HBF5 79 aa13.96□□□□□ -0.17
SMAD1-214ENST00000514831 C9orf116Q5BN46 136 aaPredicted RBP13.95□□□□□ -0.18
SMAD1-214ENST00000514831 C7orf77A4D0Y5 90 aa13.94□□□□□ -0.18
SMAD1-214ENST00000514831 MALP21145 153 aa13.94□□□□□ -0.18
SMAD1-214ENST00000514831 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
SMAD1-214ENST00000514831 CAMK2N2Q96S95 79 aa13.94□□□□□ -0.18
SMAD1-214ENST00000514831 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.93□□□□□ -0.18
SMAD1-214ENST00000514831 COX7A2LO14548 114 aa13.93□□□□□ -0.18
SMAD1-214ENST00000514831 TRBV27A0A0K0K1C4 114 aa13.92□□□□□ -0.18
SMAD1-214ENST00000514831 C1orf196B1AJZ1 125 aa13.92□□□□□ -0.18
SMAD1-214ENST00000514831 POLR2KP53803 58 aaKnown RBP13.92□□□□□ -0.18
SMAD1-214ENST00000514831 C1orf137Q5JT78 98 aa13.92□□□□□ -0.18
SMAD1-214ENST00000514831 C2orf48Q96LS8 159 aa13.91□□□□□ -0.18
SMAD1-214ENST00000514831 A8MWL6 223 aa13.9□□□□□ -0.18
SMAD1-214ENST00000514831 GATCO43716 136 aaKnown RBP13.9□□□□□ -0.18
SMAD1-214ENST00000514831 RPL18AQ02543 176 aaKnown RBP13.9□□□□□ -0.18
SMAD1-214ENST00000514831 PHF5AQ7RTV0 110 aaKnown RBP13.9□□□□□ -0.18
SMAD1-214ENST00000514831 FAM231DQ6ZW35 169 aa13.89□□□□□ -0.19
SMAD1-214ENST00000514831 PRR26Q8N8Z3 221 aa13.89□□□□□ -0.19
SMAD1-214ENST00000514831 CSDC2Q9Y534 153 aaKnown RBP13.89□□□□□ -0.19
SMAD1-214ENST00000514831 CT83Q5H943 113 aa13.88□□□□□ -0.19
SMAD1-214ENST00000514831 DIRC1Q969H9 104 aa13.88□□□□□ -0.19
SMAD1-214ENST00000514831 IGLV7-43P04211 117 aa13.87□□□□□ -0.19
SMAD1-214ENST00000514831 BORCS7Q96B45 105 aa13.87□□□□□ -0.19
SMAD1-214ENST00000514831 TMEM191AQ9H0A3 160 aa13.87□□□□□ -0.19
SMAD1-214ENST00000514831 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
SMAD1-214ENST00000514831 UBE2D4Q9Y2X8 147 aa13.86□□□□□ -0.19
SMAD1-214ENST00000514831 SMAGPQ0VAQ4 97 aa13.85□□□□□ -0.19
SMAD1-214ENST00000514831 RAB4AP20338 218 aa13.84□□□□□ -0.19
SMAD1-214ENST00000514831 SPAG11BQ08648 103 aa13.84□□□□□ -0.19
SMAD1-214ENST00000514831 RNASE13Q5GAN3 156 aaKnown RBP13.84□□□□□ -0.19
SMAD1-214ENST00000514831 OPRPNQ99935 248 aaPredicted RBP13.84□□□□□ -0.19
SMAD1-214ENST00000514831 TRAV13-1A0A0B4J241 112 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 A0A1B0GUT8 65 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 H0Y9J4 135 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 FCER1GP30273 86 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 C5orf38Q86SI9 138 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 TSKUQ8WUA8 353 aa13.83□□□□□ -0.2
SMAD1-214ENST00000514831 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
SMAD1-214ENST00000514831 VCYO14598 125 aa13.82□□□□□ -0.2
SMAD1-214ENST00000514831 HIGD1CA8MV81 97 aa13.81□□□□□ -0.2
SMAD1-214ENST00000514831 Q6ZUT4 128 aa13.81□□□□□ -0.2
SMAD1-214ENST00000514831 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
SMAD1-214ENST00000514831 OR10D4PQ8NGN7 298 aa13.81□□□□□ -0.2
SMAD1-214ENST00000514831 MRPL35Q9NZE8 188 aaKnown RBP13.81□□□□□ -0.2
SMAD1-214ENST00000514831 IGLV1-50A0A075B6I6 118 aa13.8□□□□□ -0.2
SMAD1-214ENST00000514831 SLC51BQ86UW2 128 aa13.79□□□□□ -0.2
SMAD1-214ENST00000514831 A0A087WZ39 114 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 F8WDY8 70 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 SUMO2P61956 95 aaKnown RBP13.78□□□□□ -0.2
SMAD1-214ENST00000514831 KRTAP11-1Q8IUC1 163 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 KIR2DL4Q99706 377 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
SMAD1-214ENST00000514831 SMKR1H3BMG3 65 aa13.77□□□□□ -0.21
SMAD1-214ENST00000514831 PPP1R17O96001 155 aa13.77□□□□□ -0.21
SMAD1-214ENST00000514831 KRTAP1-4P0C5Y4 121 aa13.77□□□□□ -0.21
SMAD1-214ENST00000514831 NRACQ8N912 160 aa13.77□□□□□ -0.21
SMAD1-214ENST00000514831 FAM168BA1KXE4 195 aa13.76□□□□□ -0.21
SMAD1-214ENST00000514831 TLX1NBP0CAT3 122 aa13.76□□□□□ -0.21
SMAD1-214ENST00000514831 ORAOV1Q8WV07 137 aa13.76□□□□□ -0.21
SMAD1-214ENST00000514831 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
SMAD1-214ENST00000514831 NDUFA1O15239 70 aa13.74□□□□□ -0.21
SMAD1-214ENST00000514831 PPP1R2P9O14990 202 aa13.73□□□□□ -0.21
SMAD1-214ENST00000514831 FAM19A5Q7Z5A7 132 aaPredicted RBP13.73□□□□□ -0.21
SMAD1-214ENST00000514831 IGHV3OR16-9A0A0B4J2B5 98 aa13.72□□□□□ -0.21
SMAD1-214ENST00000514831 CEBPGP53567 150 aa13.72□□□□□ -0.21
SMAD1-214ENST00000514831 C10orf25Q5T742 122 aa13.72□□□□□ -0.21
SMAD1-214ENST00000514831 LINC01551Q86U37 167 aa13.72□□□□□ -0.21
SMAD1-214ENST00000514831 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.21
SMAD1-214ENST00000514831 UBE2D1P51668 147 aa13.71□□□□□ -0.21
SMAD1-214ENST00000514831 RIGQ13278 110 aa13.71□□□□□ -0.21
SMAD1-214ENST00000514831 PRR4Q16378 134 aa13.71□□□□□ -0.21
SMAD1-214ENST00000514831 OSTCQ9NRP0 149 aa13.71□□□□□ -0.21
SMAD1-214ENST00000514831 TMEM241Q24JQ0 296 aa13.7□□□□□ -0.22
SMAD1-214ENST00000514831 SMIM7Q9BQ49 75 aa13.7□□□□□ -0.22
SMAD1-214ENST00000514831 SMDT1Q9H4I9 107 aa13.7□□□□□ -0.22
SMAD1-214ENST00000514831 C6orf48Q9UBA6 75 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms