RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
USP46-208ENST00000512656 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
USP46-208ENST00000512656 RPP21Q9H633 154 aaKnown RBP4.56□□□□□ -1.68
USP46-208ENST00000512656 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
USP46-208ENST00000512656 TRBV20OR9-2A0A075B6H5 130 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 IGKV3OR2-268A0A0C4DH90 116 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 APCSP02743 223 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 RNASEKQ6P5S7 137 aaKnown RBP4.55□□□□□ -1.68
USP46-208ENST00000512656 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 BTF3L4Q96K17 158 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 FAM210AQ96ND0 272 aa4.55□□□□□ -1.68
USP46-208ENST00000512656 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
USP46-208ENST00000512656 TRAV26-2A0A0B4J265 109 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 SDHAF1A6NFY7 115 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 NDUFS6O75380 124 aaKnown RBP4.54□□□□□ -1.68
USP46-208ENST00000512656 ZNF25P17030 456 aaPredicted RBP4.54□□□□□ -1.68
USP46-208ENST00000512656 COX6A2Q02221 97 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 MAJINQ3KP22 176 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 SLC51BQ86UW2 128 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
USP46-208ENST00000512656 TMEM101Q96IK0 257 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
USP46-208ENST00000512656 LINC00474Q9P2X8 69 aa4.54□□□□□ -1.68
USP46-208ENST00000512656 IGKV2-24A0A0C4DH68 120 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 A8MWL6 223 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 I3L3M4 83 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 PHOX2AO14813 284 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 GATCO43716 136 aaKnown RBP4.53□□□□□ -1.68
USP46-208ENST00000512656 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 FGF6P10767 208 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 PMCHP20382 165 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 OCC1Q8TAD7 63 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 GTSF1Q8WW33 167 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 BORCS7Q96B45 105 aa4.53□□□□□ -1.68
USP46-208ENST00000512656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.52□□□□□ -1.69
USP46-208ENST00000512656 IGHV1-58A0A0C4DH39 117 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 TRBV6-5A0A0K0K1A5 114 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
USP46-208ENST00000512656 TMEM250H0YL14 139 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 K7EN84 100 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 SMAGPQ0VAQ4 97 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 TCTE3Q8IZS6 198 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 STPG4Q8N801 248 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
USP46-208ENST00000512656 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
USP46-208ENST00000512656 CCL25O15444 150 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 XCL1P47992 114 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 SS18Q15532 418 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 FAM231DQ6ZW35 169 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 CARD19Q96LW7 228 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
USP46-208ENST00000512656 TNXBP22105 4242 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 A0A096LNI7 61 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 A0A1B0GUT8 65 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
USP46-208ENST00000512656 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
USP46-208ENST00000512656 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 CD164L2Q6UWJ8 174 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 MRPL52Q86TS9 123 aaKnown RBP4.5□□□□□ -1.69
USP46-208ENST00000512656 LYPD6BQ8NI32 183 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 LINC01600Q96MT4 127 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 TMEM191AQ9H0A3 160 aa4.5□□□□□ -1.69
USP46-208ENST00000512656 TRBV27A0A0K0K1C4 114 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 C7orf77A4D0Y5 90 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 FAM231BA6NCW3 169 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 PPP1R17O96001 155 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 TSHBP01222 138 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 ESDP10768 282 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 CEBPGP53567 150 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 SPINK6Q6UWN8 80 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
USP46-208ENST00000512656 LOC107984640A0A0U1RRK4 108 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 HIGD1CA8MV81 97 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 C1orf196B1AJZ1 125 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 COX7A2LO14548 114 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 VCYO14598 125 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 FCER1GP30273 86 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
USP46-208ENST00000512656 RIGQ13278 110 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 Q6ZRP5 223 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 TSKUQ8WUA8 353 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 SMIM7Q9BQ49 75 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
USP46-208ENST00000512656 A0A0J9YXV3 536 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 RAB4AP20338 218 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 CAMPP49913 170 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 ALKAL2Q6UX46 152 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 KIR2DL4Q99706 377 aa4.47□□□□□ -1.69
USP46-208ENST00000512656 EIF5A2Q9GZV4 153 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms