RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.52□□□□□ -0.25
LIN54-208ENST00000509748 J3QL48 77 aa13.52□□□□□ -0.25
LIN54-208ENST00000509748 PEA15Q15121 130 aa13.52□□□□□ -0.25
LIN54-208ENST00000509748 MRPL52Q86TS9 123 aaKnown RBP13.52□□□□□ -0.25
LIN54-208ENST00000509748 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
LIN54-208ENST00000509748 CDC42SE2Q9NRR3 84 aa13.51□□□□□ -0.25
LIN54-208ENST00000509748 LINC00959A0A1B0GUT2 108 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 CHTF8P0CG12 524 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 RPL37AP61513 92 aaKnown RBP13.5□□□□□ -0.25
LIN54-208ENST00000509748 HIGD2BQ4VC39 106 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
LIN54-208ENST00000509748 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
LIN54-208ENST00000509748 VCYO14598 125 aa13.49□□□□□ -0.25
LIN54-208ENST00000509748 HNRNPA3P51991 378 aaKnown RBP13.49□□□□□ -0.25
LIN54-208ENST00000509748 MRPL51Q4U2R6 128 aaKnown RBP13.49□□□□□ -0.25
LIN54-208ENST00000509748 C7orf77A4D0Y5 90 aa13.48□□□□□ -0.25
LIN54-208ENST00000509748 SUMO2P61956 95 aaKnown RBP13.48□□□□□ -0.25
LIN54-208ENST00000509748 SPACA4Q8TDM5 124 aa13.48□□□□□ -0.25
LIN54-208ENST00000509748 CCL25O15444 150 aa13.47□□□□□ -0.25
LIN54-208ENST00000509748 PPP1R17O96001 155 aa13.47□□□□□ -0.25
LIN54-208ENST00000509748 XCL1P47992 114 aa13.47□□□□□ -0.25
LIN54-208ENST00000509748 ZNF664Q8N3J9 261 aa13.47□□□□□ -0.25
LIN54-208ENST00000509748 A0A087WYN8 130 aa13.46□□□□□ -0.25
LIN54-208ENST00000509748 CAMPP49913 170 aa13.45□□□□□ -0.26
LIN54-208ENST00000509748 COX6A2Q02221 97 aa13.45□□□□□ -0.26
LIN54-208ENST00000509748 PRSS3P2Q8NHM4 247 aa13.45□□□□□ -0.26
LIN54-208ENST00000509748 TRBV24-1A0A075B6N3 115 aa13.44□□□□□ -0.26
LIN54-208ENST00000509748 CSDC2Q9Y534 153 aaKnown RBP13.44□□□□□ -0.26
LIN54-208ENST00000509748 A0A1B0GW15 77 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 LINC00862A6NCI5 91 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 OXTP01178 125 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 FCER1GP30273 86 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 SS18Q15532 418 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 PLAC8Q9NZF1 115 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
LIN54-208ENST00000509748 A0A1B0GXF2 115 aa13.42□□□□□ -0.26
LIN54-208ENST00000509748 PPP1R2P9O14990 202 aa13.42□□□□□ -0.26
LIN54-208ENST00000509748 RPL32P62910 135 aaKnown RBP13.42□□□□□ -0.26
LIN54-208ENST00000509748 DPH3Q96FX2 82 aa13.42□□□□□ -0.26
LIN54-208ENST00000509748 C20orf78Q9BR46 151 aa13.42□□□□□ -0.26
LIN54-208ENST00000509748 IGHV1-58A0A0C4DH39 117 aa13.41□□□□□ -0.26
LIN54-208ENST00000509748 LINC00526Q96FQ7 95 aa13.41□□□□□ -0.26
LIN54-208ENST00000509748 KIR2DL4Q99706 377 aa13.41□□□□□ -0.26
LIN54-208ENST00000509748 CKS2P33552 79 aa13.4□□□□□ -0.26
LIN54-208ENST00000509748 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
LIN54-208ENST00000509748 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
LIN54-208ENST00000509748 FAM104AQ969W3 186 aa13.39□□□□□ -0.27
LIN54-208ENST00000509748 HBBP68871 147 aa13.38□□□□□ -0.27
LIN54-208ENST00000509748 RNASE13Q5GAN3 156 aaKnown RBP13.38□□□□□ -0.27
LIN54-208ENST00000509748 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
LIN54-208ENST00000509748 C1orf196B1AJZ1 125 aa13.37□□□□□ -0.27
LIN54-208ENST00000509748 D6R8Y8 96 aa13.37□□□□□ -0.27
LIN54-208ENST00000509748 A0A096LNI7 61 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 IGKV2-24A0A0C4DH68 120 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 NPYP01303 97 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 S100A8P05109 93 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 MAJINQ3KP22 176 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 Q6ZUT4 128 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
LIN54-208ENST00000509748 F8W036 122 aa13.35□□□□□ -0.27
LIN54-208ENST00000509748 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
LIN54-208ENST00000509748 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
LIN54-208ENST00000509748 CARD19Q96LW7 228 aa13.34□□□□□ -0.27
LIN54-208ENST00000509748 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
LIN54-208ENST00000509748 PHOX2AO14813 284 aa13.33□□□□□ -0.28
LIN54-208ENST00000509748 STPG4Q8N801 248 aa13.33□□□□□ -0.28
LIN54-208ENST00000509748 TMEM18Q96B42 140 aa13.33□□□□□ -0.28
LIN54-208ENST00000509748 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 COX7A2LO14548 114 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 TCAPO15273 167 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 PPBPP02775 128 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 SYCNQ0VAF6 134 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 ATP5L2Q7Z4Y8 100 aa13.32□□□□□ -0.28
LIN54-208ENST00000509748 IGLV4-69A0A075B6H9 119 aa13.31□□□□□ -0.28
LIN54-208ENST00000509748 HMCN2Q8NDA2 5059 aa13.31□□□□□ -0.28
LIN54-208ENST00000509748 Q6ZRU5 148 aa13.3□□□□□ -0.28
LIN54-208ENST00000509748 C5orf38Q86SI9 138 aa13.3□□□□□ -0.28
LIN54-208ENST00000509748 OPRPNQ99935 248 aaPredicted RBP13.3□□□□□ -0.28
LIN54-208ENST00000509748 MALP21145 153 aa13.29□□□□□ -0.28
LIN54-208ENST00000509748 TMEM136Q6ZRR5 245 aa13.29□□□□□ -0.28
LIN54-208ENST00000509748 SPANXA1Q9NS26 97 aa13.29□□□□□ -0.28
LIN54-208ENST00000509748 MT1HL1P0DM35 61 aa13.28□□□□□ -0.28
LIN54-208ENST00000509748 MRPS36P82909 103 aaKnown RBP13.28□□□□□ -0.28
LIN54-208ENST00000509748 ORMDL3Q8N138 153 aa13.28□□□□□ -0.28
LIN54-208ENST00000509748 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
LIN54-208ENST00000509748 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
LIN54-208ENST00000509748 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
LIN54-208ENST00000509748 PRELID3AQ96N28 172 aa13.27□□□□□ -0.29
LIN54-208ENST00000509748 PKIGQ9Y2B9 76 aa13.27□□□□□ -0.29
LIN54-208ENST00000509748 PRSS47A8MTI9 375 aa13.26□□□□□ -0.29
LIN54-208ENST00000509748 C2orf48Q96LS8 159 aa13.26□□□□□ -0.29
LIN54-208ENST00000509748 IGHV3OR16-9A0A0B4J2B5 98 aa13.25□□□□□ -0.29
LIN54-208ENST00000509748 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
LIN54-208ENST00000509748 RAB14P61106 215 aa13.25□□□□□ -0.29
LIN54-208ENST00000509748 SERTAD4-AS1Q5TG53 156 aa13.25□□□□□ -0.29
LIN54-208ENST00000509748 ANAPC16Q96DE5 110 aa13.25□□□□□ -0.29
LIN54-208ENST00000509748 MT-ND4LP03901 98 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms