RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 Q6ZRP5 223 aa9.75□□□□□ -0.85
RAB40C-202ENST00000509637 I3L3M4 83 aa9.74□□□□□ -0.85
RAB40C-202ENST00000509637 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
RAB40C-202ENST00000509637 PMCHP20382 165 aa9.74□□□□□ -0.85
RAB40C-202ENST00000509637 ALKAL2Q6UX46 152 aa9.74□□□□□ -0.85
RAB40C-202ENST00000509637 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
RAB40C-202ENST00000509637 BIN3Q9NQY0 253 aa9.74□□□□□ -0.85
RAB40C-202ENST00000509637 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
RAB40C-202ENST00000509637 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
RAB40C-202ENST00000509637 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
RAB40C-202ENST00000509637 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
RAB40C-202ENST00000509637 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
RAB40C-202ENST00000509637 BLOC1S1P78537 153 aa9.72□□□□□ -0.85
RAB40C-202ENST00000509637 RNASE13Q5GAN3 156 aaKnown RBP9.72□□□□□ -0.85
RAB40C-202ENST00000509637 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
RAB40C-202ENST00000509637 GATCO43716 136 aaKnown RBP9.71□□□□□ -0.86
RAB40C-202ENST00000509637 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
RAB40C-202ENST00000509637 NUP35Q8NFH5 326 aa9.71□□□□□ -0.86
RAB40C-202ENST00000509637 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
RAB40C-202ENST00000509637 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
RAB40C-202ENST00000509637 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
RAB40C-202ENST00000509637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
RAB40C-202ENST00000509637 RAB4AP20338 218 aa9.7□□□□□ -0.86
RAB40C-202ENST00000509637 CAMPP49913 170 aa9.7□□□□□ -0.86
RAB40C-202ENST00000509637 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
RAB40C-202ENST00000509637 TRBV27A0A0K0K1C4 114 aa9.69□□□□□ -0.86
RAB40C-202ENST00000509637 SS18Q15532 418 aa9.69□□□□□ -0.86
RAB40C-202ENST00000509637 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
RAB40C-202ENST00000509637 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
RAB40C-202ENST00000509637 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
RAB40C-202ENST00000509637 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
RAB40C-202ENST00000509637 TEX261Q6UWH6 196 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 TMEM101Q96IK0 257 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 BTF3L4Q96K17 158 aa9.68□□□□□ -0.86
RAB40C-202ENST00000509637 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
RAB40C-202ENST00000509637 C5orf38Q86SI9 138 aa9.67□□□□□ -0.86
RAB40C-202ENST00000509637 KRTAP7-1Q8IUC3 87 aa9.67□□□□□ -0.86
RAB40C-202ENST00000509637 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
RAB40C-202ENST00000509637 NRACQ8N912 160 aa9.67□□□□□ -0.86
RAB40C-202ENST00000509637 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
RAB40C-202ENST00000509637 A8MWL6 223 aa9.66□□□□□ -0.86
RAB40C-202ENST00000509637 SMIM15Q7Z3B0 74 aa9.66□□□□□ -0.86
RAB40C-202ENST00000509637 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
RAB40C-202ENST00000509637 C7orf77A4D0Y5 90 aa9.65□□□□□ -0.86
RAB40C-202ENST00000509637 Q6ZUT4 128 aa9.65□□□□□ -0.86
RAB40C-202ENST00000509637 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
RAB40C-202ENST00000509637 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
RAB40C-202ENST00000509637 APOMO95445 188 aa9.64□□□□□ -0.87
RAB40C-202ENST00000509637 C10orf25Q5T742 122 aa9.64□□□□□ -0.87
RAB40C-202ENST00000509637 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 A0A1B0GUT8 65 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 TMEM250H0YL14 139 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 COX7A2LO14548 114 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 CT83Q5H943 113 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
RAB40C-202ENST00000509637 C1orf196B1AJZ1 125 aa9.62□□□□□ -0.87
RAB40C-202ENST00000509637 LINC01551Q86U37 167 aa9.62□□□□□ -0.87
RAB40C-202ENST00000509637 TSKUQ8WUA8 353 aa9.62□□□□□ -0.87
RAB40C-202ENST00000509637 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
RAB40C-202ENST00000509637 CSDC2Q9Y534 153 aaKnown RBP9.62□□□□□ -0.87
RAB40C-202ENST00000509637 MT-ND6P03923 174 aa9.61□□□□□ -0.87
RAB40C-202ENST00000509637 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
RAB40C-202ENST00000509637 MALP21145 153 aa9.61□□□□□ -0.87
RAB40C-202ENST00000509637 V9GYV3 84 aa9.61□□□□□ -0.87
RAB40C-202ENST00000509637 VCYO14598 125 aa9.6□□□□□ -0.87
RAB40C-202ENST00000509637 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
RAB40C-202ENST00000509637 CEBPGP53567 150 aa9.6□□□□□ -0.87
RAB40C-202ENST00000509637 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
RAB40C-202ENST00000509637 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
RAB40C-202ENST00000509637 EIF5A2Q9GZV4 153 aaKnown RBP9.6□□□□□ -0.87
RAB40C-202ENST00000509637 PKIGQ9Y2B9 76 aa9.6□□□□□ -0.87
RAB40C-202ENST00000509637 RAB14P61106 215 aa9.59□□□□□ -0.87
RAB40C-202ENST00000509637 SUMO2P61956 95 aaKnown RBP9.59□□□□□ -0.87
RAB40C-202ENST00000509637 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
RAB40C-202ENST00000509637 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
RAB40C-202ENST00000509637 FAM210AQ96ND0 272 aa9.59□□□□□ -0.87
RAB40C-202ENST00000509637 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
RAB40C-202ENST00000509637 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
RAB40C-202ENST00000509637 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
RAB40C-202ENST00000509637 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
RAB40C-202ENST00000509637 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
RAB40C-202ENST00000509637 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
RAB40C-202ENST00000509637 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
RAB40C-202ENST00000509637 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
RAB40C-202ENST00000509637 FCER1GP30273 86 aa9.56□□□□□ -0.88
RAB40C-202ENST00000509637 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
RAB40C-202ENST00000509637 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
RAB40C-202ENST00000509637 H0Y9J4 135 aa9.55□□□□□ -0.88
RAB40C-202ENST00000509637 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
RAB40C-202ENST00000509637 FAM104BQ5XKR9 115 aa9.55□□□□□ -0.88
RAB40C-202ENST00000509637 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
RAB40C-202ENST00000509637 A0A087WZ39 114 aa9.54□□□□□ -0.88
RAB40C-202ENST00000509637 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
RAB40C-202ENST00000509637 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
RAB40C-202ENST00000509637 C9JQL5 133 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms