RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 DKK2Q9UBU2 259 aa7.46□□□□□ -1.22
CPNE4-206ENST00000505957 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 PCP4L1A6NKN8 68 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 F8VRH5 84 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 IGLC3P0DOY3 106 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 PLNP26678 52 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 DDTP30046 118 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 BAALCQ8WXS3 180 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 PRO1933Q9H354 126 aa7.45□□□□□ -1.22
CPNE4-206ENST00000505957 TRGV4A0A0C4DH28 118 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 H0Y8G0 127 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 DPM2O94777 84 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 PAPPA-AS1Q5QFB9 102 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 ATOH7Q8N100 152 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 MAPKAPK5-AS1Q8N8E1 139 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 TIMM21Q9BVV7 248 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 SPANXA1Q9NS26 97 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 UQCR10Q9UDW1 63 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 Q9UF83 564 aa7.44□□□□□ -1.22
CPNE4-206ENST00000505957 C16orf90A8MZG2 172 aa7.43□□□□□ -1.22
CPNE4-206ENST00000505957 IGKCP01834 107 aa7.43□□□□□ -1.22
CPNE4-206ENST00000505957 EMP1P54849 157 aa7.43□□□□□ -1.22
CPNE4-206ENST00000505957 RPL39P62891 51 aaKnown RBP7.43□□□□□ -1.22
CPNE4-206ENST00000505957 SMAGPQ0VAQ4 97 aa7.43□□□□□ -1.22
CPNE4-206ENST00000505957 PMVKQ15126 192 aa7.43□□□□□ -1.22
CPNE4-206ENST00000505957 MRPL52Q86TS9 123 aaKnown RBP7.43□□□□□ -1.22
CPNE4-206ENST00000505957 LINC00587B1AMM8 73 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 H7C423 109 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 MRPS36P82909 103 aaKnown RBP7.42□□□□□ -1.22
CPNE4-206ENST00000505957 MAJINQ3KP22 176 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 Q8N1X5 172 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
CPNE4-206ENST00000505957 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
CPNE4-206ENST00000505957 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
CPNE4-206ENST00000505957 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
CPNE4-206ENST00000505957 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 TNP2Q05952 138 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 AMELXQ99217 191 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 CST9LQ9H4G1 147 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 HHLA3Q9XRX5 114 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
CPNE4-206ENST00000505957 GAGE12JA6NER3 117 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 DLEU1O43261 78 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 COX8AP10176 69 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 DAD1P61803 113 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 GAGE1Q13065 139 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 GAGE4Q13068 117 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 GAGE5Q13069 117 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 GAGE13Q4V321 117 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 NFE4Q86UQ8 179 aa7.4□□□□□ -1.22
CPNE4-206ENST00000505957 DNAH5Q8TE73 4624 aa7.4□□□□□ -1.23
CPNE4-206ENST00000505957 IGLV4-69A0A075B6H9 119 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 IGHV3-38A0A0C4DH36 116 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 NBDYA0A0U1RRE5 68 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 ATP5G1P05496 136 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 HTN3P15516 51 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 ANKRD39Q53RE8 183 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 FAM104AQ969W3 186 aa7.39□□□□□ -1.23
CPNE4-206ENST00000505957 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
CPNE4-206ENST00000505957 TRAV26-1A0A087WT03 109 aa7.38□□□□□ -1.23
CPNE4-206ENST00000505957 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
CPNE4-206ENST00000505957 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
CPNE4-206ENST00000505957 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
CPNE4-206ENST00000505957 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
CPNE4-206ENST00000505957 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
CPNE4-206ENST00000505957 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 LOC100131303A0A0U1RQF7 123 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 FGF6P10767 208 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 GYPEP15421 78 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-206ENST00000505957 BOD1L2Q8IYS8 172 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 C14orf144Q96I85 54 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 VCX2Q9H322 139 aa7.37□□□□□ -1.23
CPNE4-206ENST00000505957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-206ENST00000505957 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-206ENST00000505957 H3BNG1 76 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 SIVA1O15304 175 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 PAX4O43316 350 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
CPNE4-206ENST00000505957 SH2D6Q7Z4S9 175 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 FAM19A3Q7Z5A8 133 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 STPG4Q8N801 248 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 DEFB104AQ8WTQ1 72 aa7.36□□□□□ -1.23
CPNE4-206ENST00000505957 HERC1Q15751 4861 aa7.35□□□□□ -1.23
CPNE4-206ENST00000505957 E9PLD3 99 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms