RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	CARD19	Q96LW7	228 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	LINC00959	A0A1B0GUT2	108 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	C7orf77	A4D0Y5	90 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	FAM231B	A6NCW3	169 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	HIGD1C	A8MV81	97 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	FOXA3	P55318	350 aa	Predicted RBP	10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	PRSS3P2	Q8NHM4	247 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	KIR2DL4	Q99706	377 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	TMEM191A	Q9H0A3	160 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	TMEM242	Q9NWH2	141 aa		10.38	□□□□□ -0.75
DDR1-256	ENST00000505066	ZNF727	A8MUV8	499 aa		10.37	□□□□□ -0.75
DDR1-256	ENST00000505066	VCY	O14598	125 aa		10.37	□□□□□ -0.75
DDR1-256	ENST00000505066	FOXI1	Q12951	378 aa		10.37	□□□□□ -0.75
DDR1-256	ENST00000505066	C1orf196	B1AJZ1	125 aa		10.36	□□□□□ -0.75
DDR1-256	ENST00000505066	SYCN	Q0VAF6	134 aa		10.36	□□□□□ -0.75
DDR1-256	ENST00000505066	REG3G	Q6UW15	175 aa		10.36	□□□□□ -0.75
DDR1-256	ENST00000505066	CD164L2	Q6UWJ8	174 aa		10.36	□□□□□ -0.75
DDR1-256	ENST00000505066	ZNF664	Q8N3J9	261 aa		10.36	□□□□□ -0.75
DDR1-256	ENST00000505066	PPP1R2P9	O14990	202 aa		10.35	□□□□□ -0.75
DDR1-256	ENST00000505066	OSTC	Q9NRP0	149 aa		10.35	□□□□□ -0.75
DDR1-256	ENST00000505066	COX7A2L	O14548	114 aa		10.34	□□□□□ -0.75
DDR1-256	ENST00000505066	TCAP	O15273	167 aa		10.34	□□□□□ -0.75
DDR1-256	ENST00000505066	APOM	O95445	188 aa		10.34	□□□□□ -0.75
DDR1-256	ENST00000505066	TSHB	P01222	138 aa		10.34	□□□□□ -0.75
DDR1-256	ENST00000505066	MRPL52	Q86TS9	123 aa	Known RBP	10.34	□□□□□ -0.75
DDR1-256	ENST00000505066	TRBV27	A0A0K0K1C4	114 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	ESD	P10768	282 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	RAB4A	P20338	218 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	CAMP	P49913	170 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	PRR3	P79522	188 aa	Known RBP	10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	LINC01551	Q86U37	167 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066	CDC42SE2	Q9NRR3	84 aa		10.33	□□□□□ -0.76
DDR1-256	ENST00000505066		A0A096LNI7	61 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066	LOC107984640	A0A0U1RRK4	108 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066	FAM74A3	Q4VXF1	159 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066		Q6ZRP5	223 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066	AMN1	Q8IY45	258 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066	NAT8B	Q9UHF3	227 aa		10.32	□□□□□ -0.76
DDR1-256	ENST00000505066	GAGE2B	Q13066	116 aa		10.31	□□□□□ -0.76
DDR1-256	ENST00000505066	TMEM241	Q24JQ0	296 aa		10.31	□□□□□ -0.76
DDR1-256	ENST00000505066	CAMK2N2	Q96S95	79 aa		10.31	□□□□□ -0.76
DDR1-256	ENST00000505066	hCG_2014768	A0A024R1R8	64 aa		10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	IGLV4-69	A0A075B6H9	119 aa		10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	S100A8	P05109	93 aa		10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	POLR2K	P53803	58 aa	Known RBP	10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	SUMO2	P61956	95 aa	Known RBP	10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	SPINK6	Q6UWN8	80 aa		10.3	□□□□□ -0.76
DDR1-256	ENST00000505066	TRAV13-1	A0A0B4J241	112 aa		10.29	□□□□□ -0.76
DDR1-256	ENST00000505066		A0A1B0GW15	77 aa		10.29	□□□□□ -0.76
DDR1-256	ENST00000505066	CSDC2	Q9Y534	153 aa	Known RBP	10.29	□□□□□ -0.76
DDR1-256	ENST00000505066	CKS2	P33552	79 aa		10.28	□□□□□ -0.76
DDR1-256	ENST00000505066	LINC00526	Q96FQ7	95 aa		10.28	□□□□□ -0.76
DDR1-256	ENST00000505066	LINC00862	A6NCI5	91 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066		F8W036	122 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066	MT1HL1	P0DM35	61 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066	ADIRF	Q15847	76 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066	NUP35	Q8NFH5	326 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066	LINC01600	Q96MT4	127 aa		10.27	□□□□□ -0.77
DDR1-256	ENST00000505066	SMKR1	H3BMG3	65 aa		10.26	□□□□□ -0.77
DDR1-256	ENST00000505066	PTTG1IP	P53801	180 aa		10.26	□□□□□ -0.77
DDR1-256	ENST00000505066	C2orf48	Q96LS8	159 aa		10.26	□□□□□ -0.77
DDR1-256	ENST00000505066	C20orf78	Q9BR46	151 aa		10.26	□□□□□ -0.77
DDR1-256	ENST00000505066	GAS8-AS1	O95177	125 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	MT-ND6	P03923	174 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	SRP19	P09132	144 aa	Known RBP	10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	RPL18A	Q02543	176 aa	Known RBP	10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	PEA15	Q15121	130 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	TIMM21	Q9BVV7	248 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	UBE2D4	Q9Y2X8	147 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066		V9GYV3	84 aa		10.25	□□□□□ -0.77
DDR1-256	ENST00000505066	FAM104B	Q5XKR9	115 aa		10.24	□□□□□ -0.77
DDR1-256	ENST00000505066	NAT8	Q9UHE5	227 aa		10.24	□□□□□ -0.77
DDR1-256	ENST00000505066	LRP1	Q07954	4544 aa	Known RBP	10.23	□□□□□ -0.77
DDR1-256	ENST00000505066		F8WDY8	70 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	RAB5A	P20339	215 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	SPAG11B	Q08648	103 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	RNASE13	Q5GAN3	156 aa	Known RBP	10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	C5orf38	Q86SI9	138 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	OR10D4P	Q8NGN7	298 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066	IMMP2L	Q96T52	175 aa		10.23	□□□□□ -0.77
DDR1-256	ENST00000505066		A0A0J9YXV3	536 aa		10.22	□□□□□ -0.77
DDR1-256	ENST00000505066	SPANXA1	Q9NS26	97 aa		10.22	□□□□□ -0.77
DDR1-256	ENST00000505066	HBB	P68871	147 aa		10.21	□□□□□ -0.77
DDR1-256	ENST00000505066	MRPL51	Q4U2R6	128 aa	Known RBP	10.21	□□□□□ -0.77
DDR1-256	ENST00000505066	NRAC	Q8N912	160 aa		10.21	□□□□□ -0.77
DDR1-256	ENST00000505066	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	PPBP	P02775	128 aa		10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	RPL23	P62829	140 aa	Known RBP	10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	RPL32	P62910	135 aa	Known RBP	10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	RNF151	Q2KHN1	245 aa		10.2	□□□□□ -0.78
DDR1-256	ENST00000505066		Q6ZUT4	128 aa		10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	ORAOV1	Q8WV07	137 aa		10.2	□□□□□ -0.78
DDR1-256	ENST00000505066	SMIM27	A0A1W2PRY6	76 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	IFITM10	A6NMD0	228 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	NDUFA1	O15239	70 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	TNFRSF6B	O95407	300 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	SMDT1	Q9H4I9	107 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	HMCN2	Q8NDA2	5059 aa		10.19	□□□□□ -0.78
DDR1-256	ENST00000505066	TRBV24-1	A0A075B6N3	115 aa		10.18	□□□□□ -0.78
DDR1-256	ENST00000505066	IFI27	P40305	119 aa	Predicted RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms