RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.22
NUDCD3-211ENST00000497978 SMIM7Q9BQ49 75 aa7.46□□□□□ -1.22
NUDCD3-211ENST00000497978 EIF5A2Q9GZV4 153 aaKnown RBP7.46□□□□□ -1.22
NUDCD3-211ENST00000497978 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.22
NUDCD3-211ENST00000497978 PKIGQ9Y2B9 76 aa7.46□□□□□ -1.22
NUDCD3-211ENST00000497978 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 XCL1P47992 114 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 MAJINQ3KP22 176 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
NUDCD3-211ENST00000497978 IGKV2-24A0A0C4DH68 120 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 ZNF727A8MUV8 499 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 TSHBP01222 138 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 FOXI1Q12951 378 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 SS18Q15532 418 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 PRSS3P2Q8NHM4 247 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 TMEM242Q9NWH2 141 aa7.44□□□□□ -1.22
NUDCD3-211ENST00000497978 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 PHOX2AO14813 284 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 CCL25O15444 150 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 ESDP10768 282 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 LINC01551Q86U37 167 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 STPG4Q8N801 248 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 OSTCQ9NRP0 149 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
NUDCD3-211ENST00000497978 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 GAS8-AS1O95177 125 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 PPP1R17O96001 155 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 RAB4AP20338 218 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 SMAGPQ0VAQ4 97 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 RIGQ13278 110 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
NUDCD3-211ENST00000497978 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 VCYO14598 125 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 FCER1GP30273 86 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 CDC42SE2Q9NRR3 84 aa7.41□□□□□ -1.22
NUDCD3-211ENST00000497978 A0A096LNI7 61 aa7.4□□□□□ -1.22
NUDCD3-211ENST00000497978 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
NUDCD3-211ENST00000497978 MT1HL1P0DM35 61 aa7.4□□□□□ -1.22
NUDCD3-211ENST00000497978 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.23
NUDCD3-211ENST00000497978 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 MALP21145 153 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 TMEM241Q24JQ0 296 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 LINC00526Q96FQ7 95 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 KIR2DL4Q99706 377 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 V9GYV3 84 aa7.39□□□□□ -1.23
NUDCD3-211ENST00000497978 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 SUMO2P61956 95 aaKnown RBP7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 TMEM18Q96B42 140 aa7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 CSDC2Q9Y534 153 aaKnown RBP7.38□□□□□ -1.23
NUDCD3-211ENST00000497978 COX7A2LO14548 114 aa7.37□□□□□ -1.23
NUDCD3-211ENST00000497978 CAMPP49913 170 aa7.37□□□□□ -1.23
NUDCD3-211ENST00000497978 LOC107984640A0A0U1RRK4 108 aa7.36□□□□□ -1.23
NUDCD3-211ENST00000497978 ADIRFQ15847 76 aa7.36□□□□□ -1.23
NUDCD3-211ENST00000497978 NRACQ8N912 160 aa7.36□□□□□ -1.23
NUDCD3-211ENST00000497978 UBE2D4Q9Y2X8 147 aa7.36□□□□□ -1.23
NUDCD3-211ENST00000497978 IGLV4-69A0A075B6H9 119 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 A0A1B0GW15 77 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 LINC00862A6NCI5 91 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 TCAPO15273 167 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 MRPL51Q4U2R6 128 aaKnown RBP7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 FAM104BQ5XKR9 115 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
NUDCD3-211ENST00000497978 APOMO95445 188 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 PTTG1IPP53801 180 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 REG3GQ6UW15 175 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 SPINK6Q6UWN8 80 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 Q6ZRP5 223 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 LINC01600Q96MT4 127 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 CAMK2N2Q96S95 79 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
NUDCD3-211ENST00000497978 SMIM27A0A1W2PRY6 76 aa7.33□□□□□ -1.24
NUDCD3-211ENST00000497978 S100A8P05109 93 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms