RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 GAGE13Q4V321 117 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 C14orf144Q96I85 54 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 PLNP26678 52 aa13.86□□□□□ -0.19
ACTN4-208ENST00000497637 ANKRD39Q53RE8 183 aa13.86□□□□□ -0.19
ACTN4-208ENST00000497637 STPG4Q8N801 248 aa13.86□□□□□ -0.19
ACTN4-208ENST00000497637 CST9LQ9H4G1 147 aa13.86□□□□□ -0.19
ACTN4-208ENST00000497637 CRYBA4P53673 196 aa13.85□□□□□ -0.19
ACTN4-208ENST00000497637 SPANXA1Q9NS26 97 aa13.85□□□□□ -0.19
ACTN4-208ENST00000497637 PAPPA-AS1Q5QFB9 102 aa13.84□□□□□ -0.19
ACTN4-208ENST00000497637 IGLV4-3A0A075B6K6 122 aa13.83□□□□□ -0.2
ACTN4-208ENST00000497637 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
ACTN4-208ENST00000497637 COX8AP10176 69 aa13.83□□□□□ -0.2
ACTN4-208ENST00000497637 TIMM21Q9BVV7 248 aa13.83□□□□□ -0.2
ACTN4-208ENST00000497637 GTSF1LQ9H1H1 148 aa13.83□□□□□ -0.2
ACTN4-208ENST00000497637 LOC100131303A0A0U1RQF7 123 aa13.82□□□□□ -0.2
ACTN4-208ENST00000497637 SPART-AS1P0CW21 52 aa13.82□□□□□ -0.2
ACTN4-208ENST00000497637 SLC25A34Q6PIV7 304 aa13.82□□□□□ -0.2
ACTN4-208ENST00000497637 DEFB4AO15263 64 aa13.81□□□□□ -0.2
ACTN4-208ENST00000497637 HNRNPA3P51991 378 aaKnown RBP13.81□□□□□ -0.2
ACTN4-208ENST00000497637 DAD1P61803 113 aa13.81□□□□□ -0.2
ACTN4-208ENST00000497637 MRPL52Q86TS9 123 aaKnown RBP13.81□□□□□ -0.2
ACTN4-208ENST00000497637 OPRPNQ99935 248 aaPredicted RBP13.81□□□□□ -0.2
ACTN4-208ENST00000497637 UBE2D4Q9Y2X8 147 aa13.81□□□□□ -0.2
ACTN4-208ENST00000497637 ZC2HC1BQ5TFG8 222 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 NTM-AS1Q6ZSK4 140 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 LINC00336Q6ZUF6 198 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 AMELXQ99217 191 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 VCX2Q9H322 139 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 PRO0255Q9UI72 69 aa13.8□□□□□ -0.2
ACTN4-208ENST00000497637 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
ACTN4-208ENST00000497637 IGLV4-69A0A075B6H9 119 aa13.79□□□□□ -0.2
ACTN4-208ENST00000497637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-208ENST00000497637 TEX48A0A1B0GUV7 120 aa13.79□□□□□ -0.2
ACTN4-208ENST00000497637 IGKV2-29A2NJV5 120 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-208ENST00000497637 DLEU1O43261 78 aa13.79□□□□□ -0.2
ACTN4-208ENST00000497637 PKHD1P08F94 4074 aa13.79□□□□□ -0.2
ACTN4-208ENST00000497637 FGF6P10767 208 aa13.78□□□□□ -0.2
ACTN4-208ENST00000497637 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
ACTN4-208ENST00000497637 TMEM97Q5BJF2 176 aa13.78□□□□□ -0.2
ACTN4-208ENST00000497637 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
ACTN4-208ENST00000497637 CTAG1AP78358 180 aa13.77□□□□□ -0.21
ACTN4-208ENST00000497637 SMAGPQ0VAQ4 97 aa13.77□□□□□ -0.21
ACTN4-208ENST00000497637 NFE4Q86UQ8 179 aa13.77□□□□□ -0.21
ACTN4-208ENST00000497637 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
ACTN4-208ENST00000497637 BOD1L2Q8IYS8 172 aa13.76□□□□□ -0.21
ACTN4-208ENST00000497637 TMEM243Q9BU79 118 aa13.76□□□□□ -0.21
ACTN4-208ENST00000497637 H7C423 109 aa13.75□□□□□ -0.21
ACTN4-208ENST00000497637 ATP5G1P05496 136 aa13.75□□□□□ -0.21
ACTN4-208ENST00000497637 GYPEP15421 78 aa13.75□□□□□ -0.21
ACTN4-208ENST00000497637 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
ACTN4-208ENST00000497637 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
ACTN4-208ENST00000497637 M0R143 59 aa13.74□□□□□ -0.21
ACTN4-208ENST00000497637 PAX4O43316 350 aa13.74□□□□□ -0.21
ACTN4-208ENST00000497637 VPS13DQ5THJ4 4388 aa13.73□□□□□ -0.21
ACTN4-208ENST00000497637 NMUP48645 174 aa13.73□□□□□ -0.21
ACTN4-208ENST00000497637 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
ACTN4-208ENST00000497637 TRBV25-1A0A075B6N4 114 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 A0A0J9YWU9 116 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 SIVA1O15304 175 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 DGAT2L7PQ6IED9 249 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 Q6ZUT4 128 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 SNHG12Q9BXW3 62 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
ACTN4-208ENST00000497637 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
ACTN4-208ENST00000497637 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
ACTN4-208ENST00000497637 E9PLD3 99 aa13.71□□□□□ -0.21
ACTN4-208ENST00000497637 TCTAP57738 103 aa13.71□□□□□ -0.21
ACTN4-208ENST00000497637 VSIG2Q96IQ7 327 aa13.71□□□□□ -0.21
ACTN4-208ENST00000497637 A0A0J9YXV3 536 aa13.7□□□□□ -0.22
ACTN4-208ENST00000497637 HERVK_113P61574 105 aa13.7□□□□□ -0.22
ACTN4-208ENST00000497637 C2orf88Q9BSF0 95 aa13.7□□□□□ -0.22
ACTN4-208ENST00000497637 TP73-AS1Q9UF72 201 aa13.7□□□□□ -0.22
ACTN4-208ENST00000497637 F5H768 121 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 UBE2L6O14933 153 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 EREGO14944 169 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 LBHQ53QV2 105 aaPredicted RBP13.69□□□□□ -0.22
ACTN4-208ENST00000497637 C2orf91Q6ZV80 131 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 CHAC1Q9BUX1 264 aa13.69□□□□□ -0.22
ACTN4-208ENST00000497637 A0A1B0GVY2 172 aa13.68□□□□□ -0.22
ACTN4-208ENST00000497637 OR5A1Q8NGJ0 315 aa13.68□□□□□ -0.22
ACTN4-208ENST00000497637 TINCRA0A1B0GVN0 87 aa13.67□□□□□ -0.22
ACTN4-208ENST00000497637 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
ACTN4-208ENST00000497637 ZNF25P17030 456 aaPredicted RBP13.67□□□□□ -0.22
ACTN4-208ENST00000497637 RNASE13Q5GAN3 156 aaKnown RBP13.67□□□□□ -0.22
ACTN4-208ENST00000497637 TMEM170BQ5T4T1 132 aa13.67□□□□□ -0.22
ACTN4-208ENST00000497637 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
ACTN4-208ENST00000497637 TRAV26-1A0A087WT03 109 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 UBE2D1P51668 147 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 TIRAPP58753 221 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 MAPKAPK5-AS1Q8N8E1 139 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 CDC42SE2Q9NRR3 84 aa13.66□□□□□ -0.22
ACTN4-208ENST00000497637 A0A0J9YY99 117 aa13.65□□□□□ -0.22
ACTN4-208ENST00000497637 TMEM223A0PJW6 202 aa13.65□□□□□ -0.22
ACTN4-208ENST00000497637 GAGE6Q13070 117 aa13.65□□□□□ -0.22
ACTN4-208ENST00000497637 SH2D6Q7Z4S9 175 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms