RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 TMEM101Q96IK0 257 aa10.13□□□□□ -0.79
SUPT20H-223ENST00000497318 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
SUPT20H-223ENST00000497318 FGF6P10767 208 aa10.12□□□□□ -0.79
SUPT20H-223ENST00000497318 ZNF25P17030 456 aaPredicted RBP10.12□□□□□ -0.79
SUPT20H-223ENST00000497318 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
SUPT20H-223ENST00000497318 PRR26Q8N8Z3 221 aa10.12□□□□□ -0.79
SUPT20H-223ENST00000497318 CNFNQ9BYD5 112 aa10.12□□□□□ -0.79
SUPT20H-223ENST00000497318 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
SUPT20H-223ENST00000497318 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
SUPT20H-223ENST00000497318 CCL25O15444 150 aa10.11□□□□□ -0.79
SUPT20H-223ENST00000497318 APCSP02743 223 aa10.11□□□□□ -0.79
SUPT20H-223ENST00000497318 PRR4Q16378 134 aa10.11□□□□□ -0.79
SUPT20H-223ENST00000497318 CAMPP49913 170 aa10.1□□□□□ -0.79
SUPT20H-223ENST00000497318 SS18Q15532 418 aa10.1□□□□□ -0.79
SUPT20H-223ENST00000497318 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
SUPT20H-223ENST00000497318 BIN3Q9NQY0 253 aa10.1□□□□□ -0.79
SUPT20H-223ENST00000497318 hCG_2014768A0A024R1R8 64 aa10.09□□□□□ -0.79
SUPT20H-223ENST00000497318 LINC00959A0A1B0GUT2 108 aa10.09□□□□□ -0.79
SUPT20H-223ENST00000497318 A0A1W2PNN7 141 aa10.09□□□□□ -0.79
SUPT20H-223ENST00000497318 KRTAP9-6A0A140TA67 174 aa10.08□□□□□ -0.8
SUPT20H-223ENST00000497318 CEBPGP53567 150 aa10.08□□□□□ -0.8
SUPT20H-223ENST00000497318 C9orf116Q5BN46 136 aaPredicted RBP10.08□□□□□ -0.8
SUPT20H-223ENST00000497318 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
SUPT20H-223ENST00000497318 FAT4Q6V0I7 4981 aa10.08□□□□□ -0.8
SUPT20H-223ENST00000497318 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
SUPT20H-223ENST00000497318 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
SUPT20H-223ENST00000497318 GATCO43716 136 aaKnown RBP10.07□□□□□ -0.8
SUPT20H-223ENST00000497318 SDHAF1A6NFY7 115 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 APOMO95445 188 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 MALP21145 153 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 TEX261Q6UWH6 196 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
SUPT20H-223ENST00000497318 TAGLN2P37802 199 aaKnown RBP10.05□□□□□ -0.8
SUPT20H-223ENST00000497318 SMIM15Q7Z3B0 74 aa10.05□□□□□ -0.8
SUPT20H-223ENST00000497318 H0Y9J4 135 aa10.04□□□□□ -0.8
SUPT20H-223ENST00000497318 PMCHP20382 165 aa10.04□□□□□ -0.8
SUPT20H-223ENST00000497318 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
SUPT20H-223ENST00000497318 TMEM250H0YL14 139 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 I3L3M4 83 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 UBE2D1P51668 147 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 AKAP14Q86UN6 197 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
SUPT20H-223ENST00000497318 A0A087WZ39 114 aa10.02□□□□□ -0.81
SUPT20H-223ENST00000497318 TSHBP01222 138 aa10.02□□□□□ -0.81
SUPT20H-223ENST00000497318 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
SUPT20H-223ENST00000497318 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
SUPT20H-223ENST00000497318 A8MWL6 223 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 SMKR1H3BMG3 65 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 COX7A2LO14548 114 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
SUPT20H-223ENST00000497318 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
SUPT20H-223ENST00000497318 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
SUPT20H-223ENST00000497318 ESDP10768 282 aa10□□□□□ -0.81
SUPT20H-223ENST00000497318 LINC01551Q86U37 167 aa10□□□□□ -0.81
SUPT20H-223ENST00000497318 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
SUPT20H-223ENST00000497318 TRBV6-5A0A0K0K1A5 114 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 LCE2BO14633 110 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 RAB4AP20338 218 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 AMN1Q8IY45 258 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 SMIM7Q9BQ49 75 aa9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 EIF5A2Q9GZV4 153 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-223ENST00000497318 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
SUPT20H-223ENST00000497318 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
SUPT20H-223ENST00000497318 RNF151Q2KHN1 245 aa9.98□□□□□ -0.81
SUPT20H-223ENST00000497318 CT83Q5H943 113 aa9.98□□□□□ -0.81
SUPT20H-223ENST00000497318 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
SUPT20H-223ENST00000497318 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
SUPT20H-223ENST00000497318 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
SUPT20H-223ENST00000497318 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
SUPT20H-223ENST00000497318 ZNF727A8MUV8 499 aa9.96□□□□□ -0.82
SUPT20H-223ENST00000497318 SMAGPQ0VAQ4 97 aa9.96□□□□□ -0.82
SUPT20H-223ENST00000497318 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
SUPT20H-223ENST00000497318 V9GYV3 84 aa9.96□□□□□ -0.82
SUPT20H-223ENST00000497318 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
SUPT20H-223ENST00000497318 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
SUPT20H-223ENST00000497318 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
SUPT20H-223ENST00000497318 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
SUPT20H-223ENST00000497318 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
SUPT20H-223ENST00000497318 C9JQL5 133 aa9.94□□□□□ -0.82
SUPT20H-223ENST00000497318 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
SUPT20H-223ENST00000497318 NRACQ8N912 160 aa9.94□□□□□ -0.82
SUPT20H-223ENST00000497318 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
SUPT20H-223ENST00000497318 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
SUPT20H-223ENST00000497318 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
SUPT20H-223ENST00000497318 F8WDY8 70 aa9.93□□□□□ -0.82
SUPT20H-223ENST00000497318 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
SUPT20H-223ENST00000497318 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
SUPT20H-223ENST00000497318 MRPL35Q9NZE8 188 aaKnown RBP9.92□□□□□ -0.82
SUPT20H-223ENST00000497318 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
SUPT20H-223ENST00000497318 RPL23P62829 140 aaKnown RBP9.91□□□□□ -0.82
SUPT20H-223ENST00000497318 UBE2BP63146 152 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms