RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 PLA2G2DQ9UNK4 145 aa10.88□□□□□ -0.67
SMC4-226ENST00000497311 I3L3M4 83 aa10.87□□□□□ -0.67
SMC4-226ENST00000497311 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
SMC4-226ENST00000497311 COX6A2Q02221 97 aa10.87□□□□□ -0.67
SMC4-226ENST00000497311 RIGQ13278 110 aa10.87□□□□□ -0.67
SMC4-226ENST00000497311 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
SMC4-226ENST00000497311 NAT8BQ9UHF3 227 aa10.87□□□□□ -0.67
SMC4-226ENST00000497311 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
SMC4-226ENST00000497311 SMIM27A0A1W2PRY6 76 aa10.86□□□□□ -0.67
SMC4-226ENST00000497311 OR5A1Q8NGJ0 315 aa10.86□□□□□ -0.67
SMC4-226ENST00000497311 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
SMC4-226ENST00000497311 BTF3L4Q96K17 158 aa10.86□□□□□ -0.67
SMC4-226ENST00000497311 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
SMC4-226ENST00000497311 IFITM2Q01629 132 aa10.85□□□□□ -0.67
SMC4-226ENST00000497311 PRSS3P2Q8NHM4 247 aa10.85□□□□□ -0.67
SMC4-226ENST00000497311 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
SMC4-226ENST00000497311 FOXI1Q12951 378 aa10.84□□□□□ -0.67
SMC4-226ENST00000497311 MAJINQ3KP22 176 aa10.84□□□□□ -0.67
SMC4-226ENST00000497311 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
SMC4-226ENST00000497311 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
SMC4-226ENST00000497311 IGKV2-24A0A0C4DH68 120 aa10.83□□□□□ -0.68
SMC4-226ENST00000497311 PHOX2AO14813 284 aa10.83□□□□□ -0.68
SMC4-226ENST00000497311 RAB4AP20338 218 aa10.83□□□□□ -0.68
SMC4-226ENST00000497311 LCE2BO14633 110 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 GAS8-AS1O95177 125 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 MT1HL1P0DM35 61 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 ESDP10768 282 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 XCL1P47992 114 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
SMC4-226ENST00000497311 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
SMC4-226ENST00000497311 A0A1B0GW15 77 aa10.81□□□□□ -0.68
SMC4-226ENST00000497311 CCL25O15444 150 aa10.81□□□□□ -0.68
SMC4-226ENST00000497311 TSHBP01222 138 aa10.81□□□□□ -0.68
SMC4-226ENST00000497311 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
SMC4-226ENST00000497311 STPG4Q8N801 248 aa10.81□□□□□ -0.68
SMC4-226ENST00000497311 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
SMC4-226ENST00000497311 POLR2KP53803 58 aaKnown RBP10.8□□□□□ -0.68
SMC4-226ENST00000497311 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
SMC4-226ENST00000497311 SS18Q15532 418 aa10.79□□□□□ -0.68
SMC4-226ENST00000497311 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
SMC4-226ENST00000497311 PKIGQ9Y2B9 76 aa10.79□□□□□ -0.68
SMC4-226ENST00000497311 A0A096LNI7 61 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 TRBV27A0A0K0K1C4 114 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 C7orf77A4D0Y5 90 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 CAMPP49913 170 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 FAM104BQ5XKR9 115 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 UQCC3Q6UW78 93 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
SMC4-226ENST00000497311 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
SMC4-226ENST00000497311 TNXBP22105 4242 aa10.77□□□□□ -0.69
SMC4-226ENST00000497311 S100A8P05109 93 aa10.77□□□□□ -0.69
SMC4-226ENST00000497311 LINC00526Q96FQ7 95 aa10.77□□□□□ -0.69
SMC4-226ENST00000497311 A0A1B0GXF2 115 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 ZNF561-AS1K7EIQ3 104 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 PPP1R17O96001 155 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 MT-ND4LP03901 98 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 HBBP68871 147 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 MRPL51Q4U2R6 128 aaKnown RBP10.76□□□□□ -0.69
SMC4-226ENST00000497311 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
SMC4-226ENST00000497311 CD164L2Q6UWJ8 174 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
SMC4-226ENST00000497311 VCYO14598 125 aa10.75□□□□□ -0.69
SMC4-226ENST00000497311 FCER1GP30273 86 aa10.75□□□□□ -0.69
SMC4-226ENST00000497311 PRR3P79522 188 aaKnown RBP10.75□□□□□ -0.69
SMC4-226ENST00000497311 NRACQ8N912 160 aa10.75□□□□□ -0.69
SMC4-226ENST00000497311 TMEM218A2RU14 115 aa10.74□□□□□ -0.69
SMC4-226ENST00000497311 LINC00862A6NCI5 91 aa10.74□□□□□ -0.69
SMC4-226ENST00000497311 F8W036 122 aa10.74□□□□□ -0.69
SMC4-226ENST00000497311 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
SMC4-226ENST00000497311 ATP5L2Q7Z4Y8 100 aa10.74□□□□□ -0.69
SMC4-226ENST00000497311 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
SMC4-226ENST00000497311 SMAGPQ0VAQ4 97 aa10.73□□□□□ -0.69
SMC4-226ENST00000497311 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
SMC4-226ENST00000497311 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
SMC4-226ENST00000497311 ADCYAP1P18509 176 aa10.72□□□□□ -0.69
SMC4-226ENST00000497311 MALP21145 153 aa10.72□□□□□ -0.69
SMC4-226ENST00000497311 CKS2P33552 79 aa10.72□□□□□ -0.69
SMC4-226ENST00000497311 CSDC2Q9Y534 153 aaKnown RBP10.72□□□□□ -0.69
SMC4-226ENST00000497311 TRBV24-1A0A075B6N3 115 aa10.71□□□□□ -0.69
SMC4-226ENST00000497311 C20orf78Q9BR46 151 aa10.71□□□□□ -0.69
SMC4-226ENST00000497311 COMMD7Q86VX2 200 aa10.7□□□□□ -0.7
SMC4-226ENST00000497311 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
SMC4-226ENST00000497311 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
SMC4-226ENST00000497311 IGLV4-69A0A075B6H9 119 aa10.69□□□□□ -0.7
SMC4-226ENST00000497311 COX7A2LO14548 114 aa10.69□□□□□ -0.7
SMC4-226ENST00000497311 PPBPP02775 128 aa10.69□□□□□ -0.7
SMC4-226ENST00000497311 RPL32P62910 135 aaKnown RBP10.69□□□□□ -0.7
SMC4-226ENST00000497311 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SMC4-226ENST00000497311 SEC11CQ9BY50 192 aa10.69□□□□□ -0.7
SMC4-226ENST00000497311 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SMC4-226ENST00000497311 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
SMC4-226ENST00000497311 D6R8Y8 96 aa10.68□□□□□ -0.7
SMC4-226ENST00000497311 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
SMC4-226ENST00000497311 PTTG1IPP53801 180 aa10.68□□□□□ -0.7
SMC4-226ENST00000497311 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms