RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
TRAPPC3-207ENST00000497251 GVQW2A0A096LPI5 108 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC3-207ENST00000497251 PHOX2AO14813 284 aa10.62□□□□□ -0.71
TRAPPC3-207ENST00000497251 RAB4AP20338 218 aa10.62□□□□□ -0.71
TRAPPC3-207ENST00000497251 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC3-207ENST00000497251 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
TRAPPC3-207ENST00000497251 A0A1B0GW15 77 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 I3L3M4 83 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 APCSP02743 223 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
TRAPPC3-207ENST00000497251 PPP1R17O96001 155 aa10.59□□□□□ -0.71
TRAPPC3-207ENST00000497251 OR5A1Q8NGJ0 315 aa10.59□□□□□ -0.71
TRAPPC3-207ENST00000497251 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
TRAPPC3-207ENST00000497251 FGF6P10767 208 aa10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 PMCHP20382 165 aa10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 PRR3P79522 188 aaKnown RBP10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 STPG4Q8N801 248 aa10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 TMEM101Q96IK0 257 aa10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 BTF3L4Q96K17 158 aa10.58□□□□□ -0.72
TRAPPC3-207ENST00000497251 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 TRBV27A0A0K0K1C4 114 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 CLLU1Q5K131 121 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 REG3GQ6UW15 175 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
TRAPPC3-207ENST00000497251 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 PPP1R2P9O14990 202 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 S100A8P05109 93 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 FOXI1Q12951 378 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
TRAPPC3-207ENST00000497251 TNXBP22105 4242 aa10.55□□□□□ -0.72
TRAPPC3-207ENST00000497251 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
TRAPPC3-207ENST00000497251 TSHBP01222 138 aa10.55□□□□□ -0.72
TRAPPC3-207ENST00000497251 ESDP10768 282 aa10.55□□□□□ -0.72
TRAPPC3-207ENST00000497251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 CAMPP49913 170 aa10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 HBBP68871 147 aa10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 NRACQ8N912 160 aa10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 TMEM242Q9NWH2 141 aa10.54□□□□□ -0.72
TRAPPC3-207ENST00000497251 A0A1B0GXF2 115 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 F8W036 122 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 VCYO14598 125 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 CCL25O15444 150 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 SUMO2P61956 95 aaKnown RBP10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 SS18Q15532 418 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 Q6ZRP5 223 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
TRAPPC3-207ENST00000497251 A0A096LNI7 61 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 LRP2P98164 4655 aa10.52□□□□□ -0.73
TRAPPC3-207ENST00000497251 TRBV24-1A0A075B6N3 115 aa10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 XCL1P47992 114 aa10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 MRPL54Q6P161 138 aaKnown RBP10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 ANAPC16Q96DE5 110 aa10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 C20orf78Q9BR46 151 aa10.51□□□□□ -0.73
TRAPPC3-207ENST00000497251 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 MT-ND4LP03901 98 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 FCER1GP30273 86 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 CKS2P33552 79 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 IFITM2Q01629 132 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 UQCC3Q6UW78 93 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
TRAPPC3-207ENST00000497251 PPBPP02775 128 aa10.49□□□□□ -0.73
TRAPPC3-207ENST00000497251 SYCNQ0VAF6 134 aa10.49□□□□□ -0.73
TRAPPC3-207ENST00000497251 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRAPPC3-207ENST00000497251 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
TRAPPC3-207ENST00000497251 TCAPO15273 167 aa10.48□□□□□ -0.73
TRAPPC3-207ENST00000497251 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
TRAPPC3-207ENST00000497251 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-207ENST00000497251 LOC107984640A0A0U1RRK4 108 aa10.47□□□□□ -0.73
TRAPPC3-207ENST00000497251 C1orf196B1AJZ1 125 aa10.47□□□□□ -0.73
TRAPPC3-207ENST00000497251 D6R8Y8 96 aa10.47□□□□□ -0.73
TRAPPC3-207ENST00000497251 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
TRAPPC3-207ENST00000497251 PTTG1IPP53801 180 aa10.46□□□□□ -0.73
TRAPPC3-207ENST00000497251 TMEM18Q96B42 140 aa10.46□□□□□ -0.73
TRAPPC3-207ENST00000497251 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
TRAPPC3-207ENST00000497251 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
TRAPPC3-207ENST00000497251 TMEM218A2RU14 115 aa10.44□□□□□ -0.74
TRAPPC3-207ENST00000497251 MALP21145 153 aa10.44□□□□□ -0.74
TRAPPC3-207ENST00000497251 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
TRAPPC3-207ENST00000497251 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
TRAPPC3-207ENST00000497251 UBE2D4Q9Y2X8 147 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms