RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 Q8N814 137 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 CLEC2BQ92478 149 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 NABP2Q9BQ15 211 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 DUSP21Q9H596 190 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 RPL26L1Q9UNX3 145 aaKnown RBP2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 HSPE1-MOB4S4R3N1 261 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 ARHGAP32A7KAX9 2087 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 TRAV12-2A0A075B6T6 113 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 A0A096LNT2 108 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 A0A0J9YX75 114 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 A6NN06 94 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 COLCA2A8K830 154 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 CPSF4O95639 269 aaKnown RBP2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 PEBP1P30086 187 aaKnown RBP2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 TPPP2P59282 170 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 ROMO1P60602 79 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 TMEM258P61165 79 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 PCBD1P61457 104 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 CATR1Q13166 79 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 ESRGQ1W209 222 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 DEFB133Q30KQ1 61 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 PABPC1L2AQ5JQF8 200 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 Q6ZUT4 128 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 GKN2Q86XP6 184 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 LINC00471Q8N535 108 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 KCNRGQ8N5I3 272 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 SNHG12Q9BXW3 62 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 AGPAT4-IT1Q9H0P7 198 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 METTL1Q9UBP6 276 aaKnown RBP2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 KLK12Q9UKR0 248 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 IER3IP1Q9Y5U9 82 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 SORL1Q92673 2214 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 SPTBP11277 2137 aa2.11□□□□□ -2.07
EXOSC3-208ENST00000496910 OR51F1A6NGY5 319 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 KLF7O75840 302 aaPredicted RBP2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 MPC2O95563 127 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 KIAA2026Q5HYC2 2103 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 C1orf134Q5TEV5 83 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 MIC13Q5XKP0 118 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 GTF2H5Q6ZYL4 71 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 ATOH7Q8N100 152 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 OR5AS1Q8N127 324 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 C10orf111Q8N326 155 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 OTOSQ8NHW6 89 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 SFT2D1Q8WV19 159 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 C20orf166-AS1Q96NR2 134 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 LINC00467Q9BRT7 94 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 SEC11CQ9BY50 192 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 RERGLQ9H628 205 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 NHP2Q9NX24 153 aaKnown RBP2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 TPRKBQ9Y3C4 175 aa2.1□□□□□ -2.07
EXOSC3-208ENST00000496910 KIAA1549Q9HCM3 1950 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 IGHV3-64A0A075B6Q5 118 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 LOC107986453A0A1B0GWG9 222 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 TNFP01375 233 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 SAA1P0DJI8 122 aaPredicted RBP2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 ZNF90Q03938 601 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 CIRBPQ14011 172 aaKnown RBP2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 LSM10Q969L4 123 aaKnown RBP2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 HYLS1Q96M11 299 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 CXCL16Q9H2A7 254 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 RPRMQ9NS64 109 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 TAS2R4Q9NYW5 299 aa2.09□□□□□ -2.07
EXOSC3-208ENST00000496910 IGLV2-18A0A075B6J9 118 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 IGLV3-16A0A075B6K0 115 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 TRAV1-1A0A0B4J248 108 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 hDV103S1A0JD37 113 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 M0R2P5 195 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 LYRM1O43325 122 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 TRACP01848 142 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 S100A10P60903 97 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 LSM3P62310 102 aaKnown RBP2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF345Q14585 488 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF791Q3KP31 576 aaPredicted RBP2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 FAM19A2Q8N3H0 131 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 C5orf17Q8NAS9 161 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 PSMF1Q92530 271 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 SAR1AQ9NR31 198 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 CHCHD2Q9Y6H1 151 aaPredicted RBP2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 LY96Q9Y6Y9 160 aa2.08□□□□□ -2.08
EXOSC3-208ENST00000496910 ODF3BA8MYP8 253 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 C10orf142B7Z368 130 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 M0R233 179 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 CRPP02741 224 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 RBP4P02753 201 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 HRES1P13985 223 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 CKS2P33552 79 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 UBA52P62987 128 aaKnown RBP2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 MRPL54Q6P161 138 aaKnown RBP2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 LINC00301Q8NCQ3 95 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 PLPP5Q8NEB5 264 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 OR2T35Q8NGX2 323 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms