RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 C15orf56Q8N910 161 aa15.54■□□□□ 0.08
HLA-C-209ENST00000495835 C7orf77A4D0Y5 90 aa15.53■□□□□ 0.08
HLA-C-209ENST00000495835 SLPIP03973 132 aa15.53■□□□□ 0.08
HLA-C-209ENST00000495835 SRSF3P84103 164 aaKnown RBP15.53■□□□□ 0.08
HLA-C-209ENST00000495835 FAM104BQ5XKR9 115 aa15.53■□□□□ 0.08
HLA-C-209ENST00000495835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.53■□□□□ 0.08
HLA-C-209ENST00000495835 KRTAP29-1A8MX34 341 aaPredicted RBP15.52■□□□□ 0.08
HLA-C-209ENST00000495835 SUMO2P61956 95 aaKnown RBP15.52■□□□□ 0.08
HLA-C-209ENST00000495835 CDC42SE2Q9NRR3 84 aa15.52■□□□□ 0.08
HLA-C-209ENST00000495835 NRACQ8N912 160 aa15.51■□□□□ 0.07
HLA-C-209ENST00000495835 KIR2DL4Q99706 377 aa15.51■□□□□ 0.07
HLA-C-209ENST00000495835 GVQW2A0A096LPI5 108 aaPredicted RBP15.5■□□□□ 0.07
HLA-C-209ENST00000495835 LINC00959A0A1B0GUT2 108 aa15.5■□□□□ 0.07
HLA-C-209ENST00000495835 S100A8P05109 93 aa15.5■□□□□ 0.07
HLA-C-209ENST00000495835 FCER1GP30273 86 aa15.5■□□□□ 0.07
HLA-C-209ENST00000495835 FOXI1Q12951 378 aa15.5■□□□□ 0.07
HLA-C-209ENST00000495835 CSDC2Q9Y534 153 aaKnown RBP15.5■□□□□ 0.07
HLA-C-209ENST00000495835 J3QL48 77 aa15.49■□□□□ 0.07
HLA-C-209ENST00000495835 CCL25O15444 150 aa15.49■□□□□ 0.07
HLA-C-209ENST00000495835 SS18Q15532 418 aa15.49■□□□□ 0.07
HLA-C-209ENST00000495835 ZNF664Q8N3J9 261 aa15.49■□□□□ 0.07
HLA-C-209ENST00000495835 C20orf78Q9BR46 151 aa15.49■□□□□ 0.07
HLA-C-209ENST00000495835 TRBV24-1A0A075B6N3 115 aa15.48■□□□□ 0.07
HLA-C-209ENST00000495835 SMKR1H3BMG3 65 aa15.48■□□□□ 0.07
HLA-C-209ENST00000495835 PANO1I0J062 215 aa15.48■□□□□ 0.07
HLA-C-209ENST00000495835 TCAPO15273 167 aa15.48■□□□□ 0.07
HLA-C-209ENST00000495835 RPL37AP61513 92 aaKnown RBP15.48■□□□□ 0.07
HLA-C-209ENST00000495835 RPL32P62910 135 aaKnown RBP15.48■□□□□ 0.07
HLA-C-209ENST00000495835 MRPL51Q4U2R6 128 aaKnown RBP15.48■□□□□ 0.07
HLA-C-209ENST00000495835 CAMPP49913 170 aa15.47■□□□□ 0.07
HLA-C-209ENST00000495835 TMEM18Q96B42 140 aa15.46■□□□□ 0.07
HLA-C-209ENST00000495835 F8W036 122 aa15.45■□□□□ 0.06
HLA-C-209ENST00000495835 CKS2P33552 79 aa15.45■□□□□ 0.06
HLA-C-209ENST00000495835 XCL1P47992 114 aa15.45■□□□□ 0.06
HLA-C-209ENST00000495835 CD164L2Q6UWJ8 174 aa15.45■□□□□ 0.06
HLA-C-209ENST00000495835 IGHV1-58A0A0C4DH39 117 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 HBBP68871 147 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 HIGD2BQ4VC39 106 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 SPACA4Q8TDM5 124 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 DPH3Q96FX2 82 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 PKIGQ9Y2B9 76 aa15.44■□□□□ 0.06
HLA-C-209ENST00000495835 C1orf196B1AJZ1 125 aa15.43■□□□□ 0.06
HLA-C-209ENST00000495835 OXTP01178 125 aa15.43■□□□□ 0.06
HLA-C-209ENST00000495835 TIMM21Q9BVV7 248 aa15.43■□□□□ 0.06
HLA-C-209ENST00000495835 UBE2D4Q9Y2X8 147 aa15.43■□□□□ 0.06
HLA-C-209ENST00000495835 A0A087WYN8 130 aa15.41■□□□□ 0.06
HLA-C-209ENST00000495835 A0A1B0GXF2 115 aa15.41■□□□□ 0.06
HLA-C-209ENST00000495835 PHOX2AO14813 284 aa15.41■□□□□ 0.06
HLA-C-209ENST00000495835 PPBPP02775 128 aa15.41■□□□□ 0.06
HLA-C-209ENST00000495835 ATP5L2Q7Z4Y8 100 aa15.41■□□□□ 0.06
HLA-C-209ENST00000495835 TNFRSF6BO95407 300 aa15.4■□□□□ 0.06
HLA-C-209ENST00000495835 COX6A2Q02221 97 aa15.4■□□□□ 0.06
HLA-C-209ENST00000495835 PLAC8Q9NZF1 115 aa15.4■□□□□ 0.06
HLA-C-209ENST00000495835 LRP1Q07954 4544 aaKnown RBP15.4■□□□□ 0.06
HLA-C-209ENST00000495835 PKHD1L1Q86WI1 4243 aa15.4■□□□□ 0.06
HLA-C-209ENST00000495835 RAB14P61106 215 aa15.39■□□□□ 0.05
HLA-C-209ENST00000495835 PNRC1Q12796 327 aaPredicted RBP15.39■□□□□ 0.05
HLA-C-209ENST00000495835 MRPL54Q6P161 138 aaKnown RBP15.39■□□□□ 0.05
HLA-C-209ENST00000495835 FAT3Q8TDW7 4589 aa15.38■□□□□ 0.05
HLA-C-209ENST00000495835 CHTF8P0CG12 524 aa15.37■□□□□ 0.05
HLA-C-209ENST00000495835 PRSS3P2Q8NHM4 247 aa15.37■□□□□ 0.05
HLA-C-209ENST00000495835 SMIM2Q9BVW6 85 aa15.37■□□□□ 0.05
HLA-C-209ENST00000495835 LINC00474Q9P2X8 69 aa15.37■□□□□ 0.05
HLA-C-209ENST00000495835 D6R8Y8 96 aa15.36■□□□□ 0.05
HLA-C-209ENST00000495835 ZNF561-AS1K7EIQ3 104 aa15.36■□□□□ 0.05
HLA-C-209ENST00000495835 COX7A2LO14548 114 aa15.34■□□□□ 0.05
HLA-C-209ENST00000495835 ANAPC16Q96DE5 110 aa15.34■□□□□ 0.05
HLA-C-209ENST00000495835 MALP21145 153 aa15.33■□□□□ 0.04
HLA-C-209ENST00000495835 ORMDL3Q8N138 153 aa15.33■□□□□ 0.04
HLA-C-209ENST00000495835 CARD19Q96LW7 228 aa15.33■□□□□ 0.04
HLA-C-209ENST00000495835 NPYP01303 97 aa15.32■□□□□ 0.04
HLA-C-209ENST00000495835 MAJINQ3KP22 176 aa15.32■□□□□ 0.04
HLA-C-209ENST00000495835 C7orf33Q8WU49 177 aa15.32■□□□□ 0.04
HLA-C-209ENST00000495835 SPANXA1Q9NS26 97 aa15.32■□□□□ 0.04
HLA-C-209ENST00000495835 MT-ND4LP03901 98 aa15.31■□□□□ 0.04
HLA-C-209ENST00000495835 SYCNQ0VAF6 134 aa15.31■□□□□ 0.04
HLA-C-209ENST00000495835 TMEM136Q6ZRR5 245 aa15.31■□□□□ 0.04
HLA-C-209ENST00000495835 TRAV13-1A0A0B4J241 112 aa15.3■□□□□ 0.04
HLA-C-209ENST00000495835 PRSS47A8MTI9 375 aa15.3■□□□□ 0.04
HLA-C-209ENST00000495835 MRPS36P82909 103 aaKnown RBP15.3■□□□□ 0.04
HLA-C-209ENST00000495835 Q6ZUT4 128 aa15.3■□□□□ 0.04
HLA-C-209ENST00000495835 LAMTOR2Q9Y2Q5 125 aa15.3■□□□□ 0.04
HLA-C-209ENST00000495835 IGKV2-24A0A0C4DH68 120 aa15.29■□□□□ 0.04
HLA-C-209ENST00000495835 APOMO95445 188 aa15.29■□□□□ 0.04
HLA-C-209ENST00000495835 Q6ZRU5 148 aa15.29■□□□□ 0.04
HLA-C-209ENST00000495835 A0A096LNI7 61 aa15.28■□□□□ 0.04
HLA-C-209ENST00000495835 HNRNPA3P51991 378 aaKnown RBP15.28■□□□□ 0.04
HLA-C-209ENST00000495835 RPL39P62891 51 aaKnown RBP15.28■□□□□ 0.04
HLA-C-209ENST00000495835 RNASE13Q5GAN3 156 aaKnown RBP15.28■□□□□ 0.04
HLA-C-209ENST00000495835 STPG4Q8N801 248 aa15.28■□□□□ 0.04
HLA-C-209ENST00000495835 LINC00526Q96FQ7 95 aa15.28■□□□□ 0.04
HLA-C-209ENST00000495835 C2orf48Q96LS8 159 aa15.28■□□□□ 0.04
HLA-C-209ENST00000495835 PRELID3AQ96N28 172 aa15.28■□□□□ 0.04
HLA-C-209ENST00000495835 RAB5AP20339 215 aa15.27■□□□□ 0.04
HLA-C-209ENST00000495835 IGLV4-69A0A075B6H9 119 aa15.26■□□□□ 0.03
HLA-C-209ENST00000495835 CLLU1Q5K131 121 aa15.26■□□□□ 0.03
HLA-C-209ENST00000495835 FAM104AQ969W3 186 aa15.26■□□□□ 0.03
HLA-C-209ENST00000495835 SERTAD4-AS1Q5TG53 156 aa15.25■□□□□ 0.03
HLA-C-209ENST00000495835 PYGO1Q9Y3Y4 419 aa15.25■□□□□ 0.03
HLA-C-209ENST00000495835 OR10D4PQ8NGN7 298 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms