RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 CCL25O15444 150 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 GATCO43716 136 aaKnown RBP7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 SS18Q15532 418 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 REG3GQ6UW15 175 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
RAPGEF3-213ENST00000494764 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 A8MWL6 223 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 SLC51BQ86UW2 128 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 LINC00526Q96FQ7 95 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
RAPGEF3-213ENST00000494764 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.25
RAPGEF3-213ENST00000494764 Q6ZRP5 223 aa7.27□□□□□ -1.25
RAPGEF3-213ENST00000494764 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
RAPGEF3-213ENST00000494764 MRAP2Q96G30 205 aa7.27□□□□□ -1.25
RAPGEF3-213ENST00000494764 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
RAPGEF3-213ENST00000494764 ESDP10768 282 aa7.26□□□□□ -1.25
RAPGEF3-213ENST00000494764 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
RAPGEF3-213ENST00000494764 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
RAPGEF3-213ENST00000494764 CD164L2Q6UWJ8 174 aa7.26□□□□□ -1.25
RAPGEF3-213ENST00000494764 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
RAPGEF3-213ENST00000494764 TSHBP01222 138 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 MALP21145 153 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 ODF1Q14990 250 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 FAM231DQ6ZW35 169 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 ZNF664Q8N3J9 261 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
RAPGEF3-213ENST00000494764 TMEM250H0YL14 139 aa7.24□□□□□ -1.25
RAPGEF3-213ENST00000494764 GAS8-AS1O95177 125 aa7.24□□□□□ -1.25
RAPGEF3-213ENST00000494764 CEBPGP53567 150 aa7.24□□□□□ -1.25
RAPGEF3-213ENST00000494764 POLR2KP53803 58 aaKnown RBP7.24□□□□□ -1.25
RAPGEF3-213ENST00000494764 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
RAPGEF3-213ENST00000494764 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 A0A1B0GUT8 65 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 C1orf196B1AJZ1 125 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 RAB4AP20338 218 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 CAMPP49913 170 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 BLOC1S1P78537 153 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 CT83Q5H943 113 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 MRPL52Q86TS9 123 aaKnown RBP7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 TMEM191AQ9H0A3 160 aa7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 TMA7Q9Y2S6 64 aaKnown RBP7.23□□□□□ -1.25
RAPGEF3-213ENST00000494764 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 C7orf77A4D0Y5 90 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 VCYO14598 125 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 FCER1GP30273 86 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 PTTG1IPP53801 180 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 UQCC3Q6UW78 93 aa7.22□□□□□ -1.25
RAPGEF3-213ENST00000494764 HIGD1CA8MV81 97 aa7.21□□□□□ -1.26
RAPGEF3-213ENST00000494764 COX7A2LO14548 114 aa7.21□□□□□ -1.26
RAPGEF3-213ENST00000494764 TSKUQ8WUA8 353 aa7.21□□□□□ -1.26
RAPGEF3-213ENST00000494764 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
RAPGEF3-213ENST00000494764 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
RAPGEF3-213ENST00000494764 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
RAPGEF3-213ENST00000494764 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
RAPGEF3-213ENST00000494764 APOMO95445 188 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 PPP1R17O96001 155 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 MT-ND6P03923 174 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 RIGQ13278 110 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 C2orf48Q96LS8 159 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 KIR2DL4Q99706 377 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 SMIM7Q9BQ49 75 aa7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 EIF5A2Q9GZV4 153 aaKnown RBP7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 CSDC2Q9Y534 153 aaKnown RBP7.19□□□□□ -1.26
RAPGEF3-213ENST00000494764 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 SMKR1H3BMG3 65 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 ALKAL2Q6UX46 152 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 C5orf38Q86SI9 138 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 TMEM18Q96B42 140 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 OSTCQ9NRP0 149 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 PSORS1C2Q9UIG4 136 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
RAPGEF3-213ENST00000494764 LPAP08519 4548 aa7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 ZNF727A8MUV8 499 aa7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 RPL18AQ02543 176 aaKnown RBP7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 C1orf137Q5JT78 98 aa7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 LINC01551Q86U37 167 aa7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
RAPGEF3-213ENST00000494764 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
RAPGEF3-213ENST00000494764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
RAPGEF3-213ENST00000494764 PPP1R2P9O14990 202 aa7.16□□□□□ -1.26
RAPGEF3-213ENST00000494764 RNF151Q2KHN1 245 aa7.15□□□□□ -1.26
RAPGEF3-213ENST00000494764 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
RAPGEF3-213ENST00000494764 SVBPQ8N300 66 aa7.15□□□□□ -1.26
RAPGEF3-213ENST00000494764 NRACQ8N912 160 aa7.15□□□□□ -1.26
RAPGEF3-213ENST00000494764 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
RAPGEF3-213ENST00000494764 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
RAPGEF3-213ENST00000494764 TIMM21Q9BVV7 248 aa7.14□□□□□ -1.27
RAPGEF3-213ENST00000494764 V9GYV3 84 aa7.14□□□□□ -1.27
RAPGEF3-213ENST00000494764 APOC3P02656 99 aa7.13□□□□□ -1.27
RAPGEF3-213ENST00000494764 SRP19P09132 144 aaKnown RBP7.13□□□□□ -1.27
RAPGEF3-213ENST00000494764 CKS2P33552 79 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms