RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 OXTP01178 125 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
UFD1-210ENST00000494054 XCL1P47992 114 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 COX6A2Q02221 97 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 RIGQ13278 110 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 NRACQ8N912 160 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 DPH3Q96FX2 82 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 MRAP2Q96G30 205 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 TMEM101Q96IK0 257 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 CCL25O15444 150 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 ADIRFQ15847 76 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
UFD1-210ENST00000494054 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 BTF3L4Q96K17 158 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 NAT8Q9UHE5 227 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
UFD1-210ENST00000494054 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
UFD1-210ENST00000494054 VCYO14598 125 aa6.17□□□□□ -1.42
UFD1-210ENST00000494054 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
UFD1-210ENST00000494054 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
UFD1-210ENST00000494054 ZNF664Q8N3J9 261 aa6.17□□□□□ -1.42
UFD1-210ENST00000494054 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
UFD1-210ENST00000494054 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
UFD1-210ENST00000494054 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
UFD1-210ENST00000494054 CAMPP49913 170 aa6.16□□□□□ -1.42
UFD1-210ENST00000494054 SUMO2P61956 95 aaKnown RBP6.16□□□□□ -1.42
UFD1-210ENST00000494054 IGHV1-58A0A0C4DH39 117 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 FCER1GP30273 86 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 PEA15Q15121 130 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 SS18Q15532 418 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 MAJINQ3KP22 176 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
UFD1-210ENST00000494054 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
UFD1-210ENST00000494054 A0A096LNI7 61 aa6.14□□□□□ -1.43
UFD1-210ENST00000494054 PHOX2AO14813 284 aa6.14□□□□□ -1.43
UFD1-210ENST00000494054 PPP1R17O96001 155 aa6.14□□□□□ -1.43
UFD1-210ENST00000494054 MRPL54Q6P161 138 aaKnown RBP6.14□□□□□ -1.43
UFD1-210ENST00000494054 TRBV24-1A0A075B6N3 115 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 PPP1R2P9O14990 202 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 CKS2P33552 79 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 STPG4Q8N801 248 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 C20orf78Q9BR46 151 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
UFD1-210ENST00000494054 CSDC2Q9Y534 153 aaKnown RBP6.13□□□□□ -1.43
UFD1-210ENST00000494054 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 A0A1B0GW15 77 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 A0A1B0GXF2 115 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 LINC00862A6NCI5 91 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 SYCNQ0VAF6 134 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 Q6ZUT4 128 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 TNXBP22105 4242 aa6.12□□□□□ -1.43
UFD1-210ENST00000494054 IGLV4-69A0A075B6H9 119 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 D6R8Y8 96 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
UFD1-210ENST00000494054 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
UFD1-210ENST00000494054 Q6ZRU5 148 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 C5orf38Q86SI9 138 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 TIMM21Q9BVV7 248 aa6.11□□□□□ -1.43
UFD1-210ENST00000494054 COX7A2LO14548 114 aa6.1□□□□□ -1.43
UFD1-210ENST00000494054 NPYP01303 97 aa6.1□□□□□ -1.43
UFD1-210ENST00000494054 MALP21145 153 aa6.1□□□□□ -1.43
UFD1-210ENST00000494054 HBBP68871 147 aa6.1□□□□□ -1.43
UFD1-210ENST00000494054 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
UFD1-210ENST00000494054 SMIM2Q9BVW6 85 aa6.1□□□□□ -1.43
UFD1-210ENST00000494054 F8W036 122 aa6.09□□□□□ -1.43
UFD1-210ENST00000494054 TCAPO15273 167 aa6.09□□□□□ -1.43
UFD1-210ENST00000494054 S100A8P05109 93 aa6.09□□□□□ -1.43
UFD1-210ENST00000494054 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
UFD1-210ENST00000494054 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
UFD1-210ENST00000494054 TMEM18Q96B42 140 aa6.09□□□□□ -1.43
UFD1-210ENST00000494054 GAGE2BQ13066 116 aa6.08□□□□□ -1.44
UFD1-210ENST00000494054 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
UFD1-210ENST00000494054 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 LOC107984640A0A0U1RRK4 108 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 A0A1W2PNN7 141 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 PPBPP02775 128 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 TMEM136Q6ZRR5 245 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 PRELID3AQ96N28 172 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 CAMK2N2Q96S95 79 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 SPANXA1Q9NS26 97 aa6.07□□□□□ -1.44
UFD1-210ENST00000494054 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms