RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
PTPRU-208ENST00000493601 HIGD1CA8MV81 97 aa10.46□□□□□ -0.73
PTPRU-208ENST00000493601 CCL25O15444 150 aa10.46□□□□□ -0.73
PTPRU-208ENST00000493601 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
PTPRU-208ENST00000493601 MRPL52Q86TS9 123 aaKnown RBP10.46□□□□□ -0.73
PTPRU-208ENST00000493601 TSKUQ8WUA8 353 aa10.46□□□□□ -0.73
PTPRU-208ENST00000493601 TMEM191AQ9H0A3 160 aa10.46□□□□□ -0.73
PTPRU-208ENST00000493601 A0A096LNI7 61 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 SS18Q15532 418 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 LINC01551Q86U37 167 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 EIF5A2Q9GZV4 153 aaKnown RBP10.45□□□□□ -0.74
PTPRU-208ENST00000493601 UBR4Q5T4S7 5183 aa10.45□□□□□ -0.74
PTPRU-208ENST00000493601 TRBV27A0A0K0K1C4 114 aa10.44□□□□□ -0.74
PTPRU-208ENST00000493601 C7orf77A4D0Y5 90 aa10.44□□□□□ -0.74
PTPRU-208ENST00000493601 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
PTPRU-208ENST00000493601 CD164L2Q6UWJ8 174 aa10.43□□□□□ -0.74
PTPRU-208ENST00000493601 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
PTPRU-208ENST00000493601 ZNF727A8MUV8 499 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 RAB4AP20338 218 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 AMN1Q8IY45 258 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
PTPRU-208ENST00000493601 FCER1GP30273 86 aa10.41□□□□□ -0.74
PTPRU-208ENST00000493601 SMAGPQ0VAQ4 97 aa10.41□□□□□ -0.74
PTPRU-208ENST00000493601 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
PTPRU-208ENST00000493601 PPP1R17O96001 155 aa10.4□□□□□ -0.74
PTPRU-208ENST00000493601 SYCNQ0VAF6 134 aa10.4□□□□□ -0.74
PTPRU-208ENST00000493601 RIGQ13278 110 aa10.4□□□□□ -0.74
PTPRU-208ENST00000493601 VCYO14598 125 aa10.39□□□□□ -0.75
PTPRU-208ENST00000493601 CAMPP49913 170 aa10.39□□□□□ -0.75
PTPRU-208ENST00000493601 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
PTPRU-208ENST00000493601 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
PTPRU-208ENST00000493601 hCG_2014768A0A024R1R8 64 aa10.38□□□□□ -0.75
PTPRU-208ENST00000493601 C1orf196B1AJZ1 125 aa10.38□□□□□ -0.75
PTPRU-208ENST00000493601 MALP21145 153 aa10.38□□□□□ -0.75
PTPRU-208ENST00000493601 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
PTPRU-208ENST00000493601 CSDC2Q9Y534 153 aaKnown RBP10.38□□□□□ -0.75
PTPRU-208ENST00000493601 V9GYV3 84 aa10.38□□□□□ -0.75
PTPRU-208ENST00000493601 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
PTPRU-208ENST00000493601 COX7A2LO14548 114 aa10.37□□□□□ -0.75
PTPRU-208ENST00000493601 PPP1R2P9O14990 202 aa10.37□□□□□ -0.75
PTPRU-208ENST00000493601 SRP19P09132 144 aaKnown RBP10.37□□□□□ -0.75
PTPRU-208ENST00000493601 SUMO2P61956 95 aaKnown RBP10.37□□□□□ -0.75
PTPRU-208ENST00000493601 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
PTPRU-208ENST00000493601 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
PTPRU-208ENST00000493601 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
PTPRU-208ENST00000493601 SPINK6Q6UWN8 80 aa10.36□□□□□ -0.75
PTPRU-208ENST00000493601 NRACQ8N912 160 aa10.36□□□□□ -0.75
PTPRU-208ENST00000493601 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
PTPRU-208ENST00000493601 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
PTPRU-208ENST00000493601 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
PTPRU-208ENST00000493601 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
PTPRU-208ENST00000493601 Q6ZRP5 223 aa10.35□□□□□ -0.75
PTPRU-208ENST00000493601 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
PTPRU-208ENST00000493601 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
PTPRU-208ENST00000493601 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
PTPRU-208ENST00000493601 TNXBP22105 4242 aa10.33□□□□□ -0.76
PTPRU-208ENST00000493601 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
PTPRU-208ENST00000493601 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
PTPRU-208ENST00000493601 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
PTPRU-208ENST00000493601 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
PTPRU-208ENST00000493601 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
PTPRU-208ENST00000493601 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 TCAPO15273 167 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 APOMO95445 188 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 ADIRFQ15847 76 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
PTPRU-208ENST00000493601 FAM104BQ5XKR9 115 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 Q6ZUT4 128 aa10.32□□□□□ -0.76
PTPRU-208ENST00000493601 A0A1B0GW15 77 aa10.31□□□□□ -0.76
PTPRU-208ENST00000493601 RPL23P62829 140 aaKnown RBP10.31□□□□□ -0.76
PTPRU-208ENST00000493601 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
PTPRU-208ENST00000493601 C20orf78Q9BR46 151 aa10.31□□□□□ -0.76
PTPRU-208ENST00000493601 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
PTPRU-208ENST00000493601 LINC00862A6NCI5 91 aa10.3□□□□□ -0.76
PTPRU-208ENST00000493601 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
PTPRU-208ENST00000493601 NAT8Q9UHE5 227 aa10.3□□□□□ -0.76
PTPRU-208ENST00000493601 TRBV24-1A0A075B6N3 115 aa10.29□□□□□ -0.76
PTPRU-208ENST00000493601 CKS2P33552 79 aa10.29□□□□□ -0.76
PTPRU-208ENST00000493601 RPL18AQ02543 176 aaKnown RBP10.29□□□□□ -0.76
PTPRU-208ENST00000493601 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
PTPRU-208ENST00000493601 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTPRU-208ENST00000493601 C5orf38Q86SI9 138 aa10.29□□□□□ -0.76
PTPRU-208ENST00000493601 OR10D4PQ8NGN7 298 aa10.29□□□□□ -0.76
PTPRU-208ENST00000493601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.28□□□□□ -0.76
PTPRU-208ENST00000493601 S100A8P05109 93 aa10.27□□□□□ -0.77
PTPRU-208ENST00000493601 RNF151Q2KHN1 245 aa10.27□□□□□ -0.77
PTPRU-208ENST00000493601 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
PTPRU-208ENST00000493601 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
PTPRU-208ENST00000493601 LRP2P98164 4655 aa10.27□□□□□ -0.77
PTPRU-208ENST00000493601 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
PTPRU-208ENST00000493601 F8W036 122 aa10.26□□□□□ -0.77
PTPRU-208ENST00000493601 TNFRSF6BO95407 300 aa10.26□□□□□ -0.77
PTPRU-208ENST00000493601 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
PTPRU-208ENST00000493601 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
PTPRU-208ENST00000493601 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
PTPRU-208ENST00000493601 C9JQL5 133 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms