RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 TCAPO15273 167 aa11.72□□□□□ -0.53
GTF3C2-212ENST00000493511 PPBPP02775 128 aa11.72□□□□□ -0.53
GTF3C2-212ENST00000493511 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
GTF3C2-212ENST00000493511 IFITM2Q01629 132 aa11.72□□□□□ -0.53
GTF3C2-212ENST00000493511 Q5VSD8 79 aa11.72□□□□□ -0.53
GTF3C2-212ENST00000493511 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 D6R8Y8 96 aa11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 FAM229AH3BQW9 127 aa11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 TNFRSF6BO95407 300 aa11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
GTF3C2-212ENST00000493511 PHOX2AO14813 284 aa11.7□□□□□ -0.54
GTF3C2-212ENST00000493511 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
GTF3C2-212ENST00000493511 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
GTF3C2-212ENST00000493511 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
GTF3C2-212ENST00000493511 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
GTF3C2-212ENST00000493511 CNBPP62633 177 aaKnown RBP11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 ORMDL3Q8N138 153 aa11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 CHAC1Q9BUX1 264 aa11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 SMIM2Q9BVW6 85 aa11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
GTF3C2-212ENST00000493511 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
GTF3C2-212ENST00000493511 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
GTF3C2-212ENST00000493511 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 NPYP01303 97 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 XCL1P47992 114 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 SS18Q15532 418 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
GTF3C2-212ENST00000493511 C15orf56Q8N910 161 aa11.65□□□□□ -0.54
GTF3C2-212ENST00000493511 PRELID3AQ96N28 172 aa11.65□□□□□ -0.54
GTF3C2-212ENST00000493511 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
GTF3C2-212ENST00000493511 CCL25O15444 150 aa11.64□□□□□ -0.55
GTF3C2-212ENST00000493511 ADCYAP1P18509 176 aa11.64□□□□□ -0.55
GTF3C2-212ENST00000493511 FOXI1Q12951 378 aa11.64□□□□□ -0.55
GTF3C2-212ENST00000493511 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
GTF3C2-212ENST00000493511 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
GTF3C2-212ENST00000493511 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
GTF3C2-212ENST00000493511 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
GTF3C2-212ENST00000493511 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 RAB5AP20339 215 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 COMMD7Q86VX2 200 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
GTF3C2-212ENST00000493511 MYCBP2O75592 4640 aa11.61□□□□□ -0.55
GTF3C2-212ENST00000493511 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
GTF3C2-212ENST00000493511 GVQW2A0A096LPI5 108 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-212ENST00000493511 PLA2G1BP04054 148 aaKnown RBP11.61□□□□□ -0.55
GTF3C2-212ENST00000493511 SDIM1Q6ZPB5 146 aa11.61□□□□□ -0.55
GTF3C2-212ENST00000493511 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
GTF3C2-212ENST00000493511 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
GTF3C2-212ENST00000493511 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
GTF3C2-212ENST00000493511 DMBT1Q9UGM3 2413 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 SLPIP03973 132 aa11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 Q6ZUT4 128 aa11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
GTF3C2-212ENST00000493511 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
GTF3C2-212ENST00000493511 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
GTF3C2-212ENST00000493511 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
GTF3C2-212ENST00000493511 S100PP25815 95 aa11.57□□□□□ -0.56
GTF3C2-212ENST00000493511 LOC389332A0A1B0GUA5 103 aa11.56□□□□□ -0.56
GTF3C2-212ENST00000493511 COX7A2LO14548 114 aa11.56□□□□□ -0.56
GTF3C2-212ENST00000493511 MALP21145 153 aa11.56□□□□□ -0.56
GTF3C2-212ENST00000493511 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
GTF3C2-212ENST00000493511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
GTF3C2-212ENST00000493511 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
GTF3C2-212ENST00000493511 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
GTF3C2-212ENST00000493511 Q8N8P6 123 aa11.54□□□□□ -0.56
GTF3C2-212ENST00000493511 K7EMI3 77 aa11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 PKIGQ9Y2B9 76 aa11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
GTF3C2-212ENST00000493511 IFITM10A6NMD0 228 aa11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 PANO1I0J062 215 aa11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 RHEBQ15382 184 aa11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 FAM104AQ969W3 186 aa11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 NXT2Q9NPJ8 142 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 CARHSP1Q9Y2V2 147 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-212ENST00000493511 APOMO95445 188 aa11.51□□□□□ -0.57
GTF3C2-212ENST00000493511 COX6A2Q02221 97 aa11.51□□□□□ -0.57
GTF3C2-212ENST00000493511 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
GTF3C2-212ENST00000493511 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
GTF3C2-212ENST00000493511 COX19Q49B96 90 aa11.5□□□□□ -0.57
GTF3C2-212ENST00000493511 SPACA4Q8TDM5 124 aa11.5□□□□□ -0.57
GTF3C2-212ENST00000493511 LINC00526Q96FQ7 95 aa11.5□□□□□ -0.57
GTF3C2-212ENST00000493511 GNB1LQ9BYB4 327 aa11.5□□□□□ -0.57
GTF3C2-212ENST00000493511 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms