RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 TWIST1Q15672 202 aa7.78□□□□□ -1.16
TREX1-204ENST00000492235 ADIRFQ15847 76 aa7.78□□□□□ -1.16
TREX1-204ENST00000492235 RASL11AQ6T310 242 aa7.78□□□□□ -1.16
TREX1-204ENST00000492235 PGLYRP4Q96LB8 373 aa7.78□□□□□ -1.16
TREX1-204ENST00000492235 LPAP08519 4548 aa7.78□□□□□ -1.16
TREX1-204ENST00000492235 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
TREX1-204ENST00000492235 HIGD1CA8MV81 97 aa7.77□□□□□ -1.17
TREX1-204ENST00000492235 NAT8BQ9UHF3 227 aa7.77□□□□□ -1.17
TREX1-204ENST00000492235 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
TREX1-204ENST00000492235 COTL1Q14019 142 aa7.76□□□□□ -1.17
TREX1-204ENST00000492235 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
TREX1-204ENST00000492235 NIT2Q9NQR4 276 aa7.76□□□□□ -1.17
TREX1-204ENST00000492235 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
TREX1-204ENST00000492235 A0A1B0GW15 77 aa7.75□□□□□ -1.17
TREX1-204ENST00000492235 SMIM27A0A1W2PRY6 76 aa7.75□□□□□ -1.17
TREX1-204ENST00000492235 PPP1R2P9O14990 202 aa7.75□□□□□ -1.17
TREX1-204ENST00000492235 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
TREX1-204ENST00000492235 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
TREX1-204ENST00000492235 RIGQ13278 110 aa7.74□□□□□ -1.17
TREX1-204ENST00000492235 Q6ZRP5 223 aa7.74□□□□□ -1.17
TREX1-204ENST00000492235 S100A8P05109 93 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 AMMECR1LQ6DCA0 310 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 NUP35Q8NFH5 326 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 ANAPC16Q96DE5 110 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
TREX1-204ENST00000492235 FOXI1Q12951 378 aa7.72□□□□□ -1.17
TREX1-204ENST00000492235 RNASEKQ6P5S7 137 aaKnown RBP7.72□□□□□ -1.17
TREX1-204ENST00000492235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.71□□□□□ -1.18
TREX1-204ENST00000492235 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 IGKV2-29A2NJV5 120 aaPredicted RBP7.71□□□□□ -1.18
TREX1-204ENST00000492235 PPP1R17O96001 155 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 MT-ND4LP03901 98 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 XCL1P47992 114 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 ATP5L2Q7Z4Y8 100 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 MRAP2Q96G30 205 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 CARD19Q96LW7 228 aa7.71□□□□□ -1.18
TREX1-204ENST00000492235 TRAV26-2A0A0B4J265 109 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 TMEM218A2RU14 115 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 LINC00862A6NCI5 91 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 SEC11CQ9BY50 192 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
TREX1-204ENST00000492235 NCR2O95944 276 aa7.69□□□□□ -1.18
TREX1-204ENST00000492235 FGF6P10767 208 aa7.69□□□□□ -1.18
TREX1-204ENST00000492235 IGHV1-58A0A0C4DH39 117 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 F8W036 122 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 CCL25O15444 150 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 APCSP02743 223 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 RAB4AP20338 218 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 HBBP68871 147 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 COMMD7Q86VX2 200 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 RPL39LQ96EH5 51 aaKnown RBP7.68□□□□□ -1.18
TREX1-204ENST00000492235 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
TREX1-204ENST00000492235 A0A1B0GXF2 115 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 H7C423 109 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 GAGE2BQ13066 116 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 CTDSP1Q9GZU7 261 aa7.67□□□□□ -1.18
TREX1-204ENST00000492235 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 SDHAF1A6NFY7 115 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 ZNF561-AS1K7EIQ3 104 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 PPBPP02775 128 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 AMN1Q8IY45 258 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 BTF3L4Q96K17 158 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 TMEM242Q9NWH2 141 aa7.66□□□□□ -1.18
TREX1-204ENST00000492235 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 A0A1W2PNN7 141 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 I3L3M4 83 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 ZNF25P17030 456 aaPredicted RBP7.65□□□□□ -1.18
TREX1-204ENST00000492235 TMEM101Q96IK0 257 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 PSORS1C2Q9UIG4 136 aa7.65□□□□□ -1.18
TREX1-204ENST00000492235 CARHSP1Q9Y2V2 147 aaKnown RBP7.65□□□□□ -1.18
TREX1-204ENST00000492235 TRBV24-1A0A075B6N3 115 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 LOC107984640A0A0U1RRK4 108 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 TCAPO15273 167 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 MT-ND6P03923 174 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 CAMPP49913 170 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
TREX1-204ENST00000492235 RPL32P62910 135 aaKnown RBP7.64□□□□□ -1.19
TREX1-204ENST00000492235 C20orf78Q9BR46 151 aa7.64□□□□□ -1.19
TREX1-204ENST00000492235 PMCHP20382 165 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 RHEBQ15382 184 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 SS18Q15532 418 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
TREX1-204ENST00000492235 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 MRPL54Q6P161 138 aaKnown RBP7.63□□□□□ -1.19
TREX1-204ENST00000492235 ZNF664Q8N3J9 261 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
TREX1-204ENST00000492235 IGLV4-69A0A075B6H9 119 aa7.62□□□□□ -1.19
TREX1-204ENST00000492235 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
TREX1-204ENST00000492235 C9orf116Q5BN46 136 aaPredicted RBP7.62□□□□□ -1.19
TREX1-204ENST00000492235 CD164L2Q6UWJ8 174 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms