RNA–Protein interactions for RNA: ENST00000491876.5

C4A-257, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 880 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-257ENST00000491876 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
C4A-257ENST00000491876 XCL1P47992 114 aa12.78□□□□□ -0.36
C4A-257ENST00000491876 A0A087WYN8 130 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 CCL25O15444 150 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 COX6A2Q02221 97 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 FAM74A3Q4VXF1 159 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 NAT8Q9UHE5 227 aa12.77□□□□□ -0.37
C4A-257ENST00000491876 NRACQ8N912 160 aa12.76□□□□□ -0.37
C4A-257ENST00000491876 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
C4A-257ENST00000491876 LINC00526Q96FQ7 95 aa12.76□□□□□ -0.37
C4A-257ENST00000491876 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
C4A-257ENST00000491876 C7orf77A4D0Y5 90 aa12.75□□□□□ -0.37
C4A-257ENST00000491876 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
C4A-257ENST00000491876 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
C4A-257ENST00000491876 CDC42SE2Q9NRR3 84 aa12.75□□□□□ -0.37
C4A-257ENST00000491876 LRP1Q07954 4544 aaKnown RBP12.75□□□□□ -0.37
C4A-257ENST00000491876 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
C4A-257ENST00000491876 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
C4A-257ENST00000491876 MRPL52Q86TS9 123 aaKnown RBP12.74□□□□□ -0.37
C4A-257ENST00000491876 SMIM27A0A1W2PRY6 76 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 VCYO14598 125 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 OXTP01178 125 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 FCER1GP30273 86 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 CAMPP49913 170 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 PEA15Q15121 130 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
C4A-257ENST00000491876 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
C4A-257ENST00000491876 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
C4A-257ENST00000491876 SS18Q15532 418 aa12.72□□□□□ -0.37
C4A-257ENST00000491876 RNASE13Q5GAN3 156 aaKnown RBP12.72□□□□□ -0.37
C4A-257ENST00000491876 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
C4A-257ENST00000491876 MAJINQ3KP22 176 aa12.71□□□□□ -0.37
C4A-257ENST00000491876 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
C4A-257ENST00000491876 IGHV1-58A0A0C4DH39 117 aa12.69□□□□□ -0.38
C4A-257ENST00000491876 PPP1R17O96001 155 aa12.69□□□□□ -0.38
C4A-257ENST00000491876 MRPL54Q6P161 138 aaKnown RBP12.69□□□□□ -0.38
C4A-257ENST00000491876 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
C4A-257ENST00000491876 FAT3Q8TDW7 4589 aa12.68□□□□□ -0.38
C4A-257ENST00000491876 A0A096LNI7 61 aa12.68□□□□□ -0.38
C4A-257ENST00000491876 CD164L2Q6UWJ8 174 aa12.68□□□□□ -0.38
C4A-257ENST00000491876 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
C4A-257ENST00000491876 PHOX2AO14813 284 aa12.67□□□□□ -0.38
C4A-257ENST00000491876 PPP1R2P9O14990 202 aa12.66□□□□□ -0.38
C4A-257ENST00000491876 CKS2P33552 79 aa12.66□□□□□ -0.38
C4A-257ENST00000491876 STPG4Q8N801 248 aa12.66□□□□□ -0.38
C4A-257ENST00000491876 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
C4A-257ENST00000491876 Q6ZUT4 128 aa12.65□□□□□ -0.38
C4A-257ENST00000491876 CARD19Q96LW7 228 aa12.65□□□□□ -0.38
C4A-257ENST00000491876 TRAV13-1A0A0B4J241 112 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 A0A1B0GW15 77 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 D6R8Y8 96 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 ZNF561-AS1K7EIQ3 104 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 RPL39P62891 51 aaKnown RBP12.64□□□□□ -0.39
C4A-257ENST00000491876 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
C4A-257ENST00000491876 CSDC2Q9Y534 153 aaKnown RBP12.64□□□□□ -0.39
C4A-257ENST00000491876 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
C4A-257ENST00000491876 A0A1B0GXF2 115 aa12.63□□□□□ -0.39
C4A-257ENST00000491876 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
C4A-257ENST00000491876 NPYP01303 97 aa12.63□□□□□ -0.39
C4A-257ENST00000491876 HBBP68871 147 aa12.63□□□□□ -0.39
C4A-257ENST00000491876 SYCNQ0VAF6 134 aa12.62□□□□□ -0.39
C4A-257ENST00000491876 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
C4A-257ENST00000491876 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 COX7A2LO14548 114 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 MALP21145 153 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 SMAGPQ0VAQ4 97 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
C4A-257ENST00000491876 F8W036 122 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 TCAPO15273 167 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 RPL32P62910 135 aaKnown RBP12.6□□□□□ -0.39
C4A-257ENST00000491876 Q6ZRU5 148 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 FAM104AQ969W3 186 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 TMEM18Q96B42 140 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 OPRPNQ99935 248 aaPredicted RBP12.6□□□□□ -0.39
C4A-257ENST00000491876 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
C4A-257ENST00000491876 S100A8P05109 93 aa12.59□□□□□ -0.39
C4A-257ENST00000491876 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
C4A-257ENST00000491876 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
C4A-257ENST00000491876 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
C4A-257ENST00000491876 CAMK2N2Q96S95 79 aa12.56□□□□□ -0.4
C4A-257ENST00000491876 PRR3P79522 188 aaKnown RBP12.55□□□□□ -0.4
C4A-257ENST00000491876 LINC00474Q9P2X8 69 aa12.55□□□□□ -0.4
C4A-257ENST00000491876 LOC107984640A0A0U1RRK4 108 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 PPBPP02775 128 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
C4A-257ENST00000491876 ATP5L2Q7Z4Y8 100 aa12.53□□□□□ -0.4
C4A-257ENST00000491876 A0A0J9YXV3 536 aa12.52□□□□□ -0.41
C4A-257ENST00000491876 SPAG11BQ08648 103 aa12.52□□□□□ -0.41
C4A-257ENST00000491876 APOMO95445 188 aa12.51□□□□□ -0.41
C4A-257ENST00000491876 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
C4A-257ENST00000491876 C2orf48Q96LS8 159 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms