RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	TSHB	P01222	138 aa		11.26	□□□□□ -0.61
GGA1-223	ENST00000491295	POLR2K	P53803	58 aa	Known RBP	11.26	□□□□□ -0.61
GGA1-223	ENST00000491295	TSKU	Q8WUA8	353 aa		11.26	□□□□□ -0.61
GGA1-223	ENST00000491295	HIGD1C	A8MV81	97 aa		11.25	□□□□□ -0.61
GGA1-223	ENST00000491295	PPP1R17	O96001	155 aa		11.25	□□□□□ -0.61
GGA1-223	ENST00000491295	SMAGP	Q0VAQ4	97 aa		11.25	□□□□□ -0.61
GGA1-223	ENST00000491295	CD164L2	Q6UWJ8	174 aa		11.25	□□□□□ -0.61
GGA1-223	ENST00000491295	CDC42SE2	Q9NRR3	84 aa		11.25	□□□□□ -0.61
GGA1-223	ENST00000491295		A0A096LNI7	61 aa		11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	RAB4A	P20338	218 aa		11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	PRR3	P79522	188 aa	Known RBP	11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	ZNF664	Q8N3J9	261 aa		11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	LINC01600	Q96MT4	127 aa		11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	OSTC	Q9NRP0	149 aa		11.24	□□□□□ -0.61
GGA1-223	ENST00000491295	C7orf77	A4D0Y5	90 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	ZNF561-AS1	K7EIQ3	104 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	CEBPG	P53567	150 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	ALKAL2	Q6UX46	152 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	LINC01551	Q86U37	167 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	CARD19	Q96LW7	228 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	SMIM7	Q9BQ49	75 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	TMEM242	Q9NWH2	141 aa		11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	CSDC2	Q9Y534	153 aa	Known RBP	11.23	□□□□□ -0.61
GGA1-223	ENST00000491295	VCY	O14598	125 aa		11.22	□□□□□ -0.61
GGA1-223	ENST00000491295	EIF5A2	Q9GZV4	153 aa	Known RBP	11.22	□□□□□ -0.61
GGA1-223	ENST00000491295	C1orf196	B1AJZ1	125 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	GAS8-AS1	O95177	125 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	SYCN	Q0VAF6	134 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	RIG	Q13278	110 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	SPINK6	Q6UWN8	80 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	AKAP14	Q86UN6	197 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	ISOC2	Q96AB3	205 aa		11.21	□□□□□ -0.61
GGA1-223	ENST00000491295	ZNF727	A8MUV8	499 aa		11.2	□□□□□ -0.62
GGA1-223	ENST00000491295	FCER1G	P30273	86 aa		11.19	□□□□□ -0.62
GGA1-223	ENST00000491295	REG3G	Q6UW15	175 aa		11.19	□□□□□ -0.62
GGA1-223	ENST00000491295	AMN1	Q8IY45	258 aa		11.19	□□□□□ -0.62
GGA1-223	ENST00000491295	MAL	P21145	153 aa		11.18	□□□□□ -0.62
GGA1-223	ENST00000491295	CAMP	P49913	170 aa		11.18	□□□□□ -0.62
GGA1-223	ENST00000491295		Q6ZRP5	223 aa		11.18	□□□□□ -0.62
GGA1-223	ENST00000491295	LINC00526	Q96FQ7	95 aa		11.18	□□□□□ -0.62
GGA1-223	ENST00000491295	KIR2DL4	Q99706	377 aa		11.18	□□□□□ -0.62
GGA1-223	ENST00000491295	LOC107984640	A0A0U1RRK4	108 aa		11.17	□□□□□ -0.62
GGA1-223	ENST00000491295	COX7A2L	O14548	114 aa		11.17	□□□□□ -0.62
GGA1-223	ENST00000491295	PPP1R2P9	O14990	202 aa		11.17	□□□□□ -0.62
GGA1-223	ENST00000491295	SUMO2	P61956	95 aa	Known RBP	11.17	□□□□□ -0.62
GGA1-223	ENST00000491295		A0A0J9YXV3	536 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	PTTG1IP	P53801	180 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	FAM74A3	Q4VXF1	159 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	NUP35	Q8NFH5	326 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	TMEM18	Q96B42	140 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295		V9GYV3	84 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	UBR4	Q5T4S7	5183 aa		11.16	□□□□□ -0.62
GGA1-223	ENST00000491295	IGLV4-69	A0A075B6H9	119 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	SRP19	P09132	144 aa	Known RBP	11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	NRAC	Q8N912	160 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	C2orf48	Q96LS8	159 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	TIMM21	Q9BVV7	248 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	NAT8B	Q9UHF3	227 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	UBE2D4	Q9Y2X8	147 aa		11.15	□□□□□ -0.62
GGA1-223	ENST00000491295	LINC00862	A6NCI5	91 aa		11.14	□□□□□ -0.63
GGA1-223	ENST00000491295	TCAP	O15273	167 aa		11.14	□□□□□ -0.63
GGA1-223	ENST00000491295	APOM	O95445	188 aa		11.14	□□□□□ -0.63
GGA1-223	ENST00000491295	TMEM241	Q24JQ0	296 aa		11.14	□□□□□ -0.63
GGA1-223	ENST00000491295	KRTAP10-8	P60410	259 aa		11.13	□□□□□ -0.63
GGA1-223	ENST00000491295	C20orf78	Q9BR46	151 aa		11.13	□□□□□ -0.63
GGA1-223	ENST00000491295	FAM104B	Q5XKR9	115 aa		11.12	□□□□□ -0.63
GGA1-223	ENST00000491295	CAMK2N2	Q96S95	79 aa		11.12	□□□□□ -0.63
GGA1-223	ENST00000491295	TRBV24-1	A0A075B6N3	115 aa		11.11	□□□□□ -0.63
GGA1-223	ENST00000491295		A0A1B0GW15	77 aa		11.11	□□□□□ -0.63
GGA1-223	ENST00000491295	SMKR1	H3BMG3	65 aa		11.11	□□□□□ -0.63
GGA1-223	ENST00000491295	RPL32	P62910	135 aa	Known RBP	11.11	□□□□□ -0.63
GGA1-223	ENST00000491295	GAGE2B	Q13066	116 aa		11.11	□□□□□ -0.63
GGA1-223	ENST00000491295	TRAV13-1	A0A0B4J241	112 aa		11.1	□□□□□ -0.63
GGA1-223	ENST00000491295		F8WDY8	70 aa		11.1	□□□□□ -0.63
GGA1-223	ENST00000491295	RNF151	Q2KHN1	245 aa		11.1	□□□□□ -0.63
GGA1-223	ENST00000491295	MRPL51	Q4U2R6	128 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-223	ENST00000491295	TNXB	P22105	4242 aa		11.1	□□□□□ -0.63
GGA1-223	ENST00000491295	SMIM27	A0A1W2PRY6	76 aa		11.09	□□□□□ -0.63
GGA1-223	ENST00000491295	RPL23	P62829	140 aa	Known RBP	11.09	□□□□□ -0.63
GGA1-223	ENST00000491295	OR10D4P	Q8NGN7	298 aa		11.08	□□□□□ -0.64
GGA1-223	ENST00000491295		A0A1W2PNN7	141 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	S100A8	P05109	93 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	CKS2	P33552	79 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	RNASE13	Q5GAN3	156 aa	Known RBP	11.07	□□□□□ -0.64
GGA1-223	ENST00000491295		Q6ZUT4	128 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	C5orf38	Q86SI9	138 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	NAT8	Q9UHE5	227 aa		11.07	□□□□□ -0.64
GGA1-223	ENST00000491295	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-223	ENST00000491295	ADIRF	Q15847	76 aa		11.06	□□□□□ -0.64
GGA1-223	ENST00000491295	C9orf116	Q5BN46	136 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-223	ENST00000491295	SMDT1	Q9H4I9	107 aa		11.06	□□□□□ -0.64
GGA1-223	ENST00000491295	SPANXA1	Q9NS26	97 aa		11.06	□□□□□ -0.64
GGA1-223	ENST00000491295	hCG_2014768	A0A024R1R8	64 aa		11.05	□□□□□ -0.64
GGA1-223	ENST00000491295		F8W036	122 aa		11.05	□□□□□ -0.64
GGA1-223	ENST00000491295	MRPS36	P82909	103 aa	Known RBP	11.05	□□□□□ -0.64
GGA1-223	ENST00000491295	SPAG11B	Q08648	103 aa		11.05	□□□□□ -0.64
GGA1-223	ENST00000491295	IMMP2L	Q96T52	175 aa		11.05	□□□□□ -0.64
GGA1-223	ENST00000491295	MRPL35	Q9NZE8	188 aa	Known RBP	11.05	□□□□□ -0.64
GGA1-223	ENST00000491295	TNFRSF6B	O95407	300 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms