RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 TMEM191AQ9H0A3 160 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 LINC00474Q9P2X8 69 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 TSHBP01222 138 aa12.44□□□□□ -0.42
SREBF1-216ENST00000490796 ESDP10768 282 aa12.44□□□□□ -0.42
SREBF1-216ENST00000490796 C7orf77A4D0Y5 90 aa12.43□□□□□ -0.42
SREBF1-216ENST00000490796 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
SREBF1-216ENST00000490796 ZNF561-AS1K7EIQ3 104 aa12.43□□□□□ -0.42
SREBF1-216ENST00000490796 FCER1GP30273 86 aa12.43□□□□□ -0.42
SREBF1-216ENST00000490796 GAS8-AS1O95177 125 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 MT1HL1P0DM35 61 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 LINC01551Q86U37 167 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 CARD19Q96LW7 228 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 OSTCQ9NRP0 149 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
SREBF1-216ENST00000490796 hCG_2014768A0A024R1R8 64 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 A0A096LNI7 61 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 RAB4AP20338 218 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
SREBF1-216ENST00000490796 RIGQ13278 110 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
SREBF1-216ENST00000490796 AMN1Q8IY45 258 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 ZNF664Q8N3J9 261 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 CDC42SE2Q9NRR3 84 aa12.41□□□□□ -0.42
SREBF1-216ENST00000490796 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
SREBF1-216ENST00000490796 VCYO14598 125 aa12.4□□□□□ -0.42
SREBF1-216ENST00000490796 PPP1R17O96001 155 aa12.4□□□□□ -0.42
SREBF1-216ENST00000490796 MALP21145 153 aa12.4□□□□□ -0.42
SREBF1-216ENST00000490796 PRR3P79522 188 aaKnown RBP12.39□□□□□ -0.43
SREBF1-216ENST00000490796 SYCNQ0VAF6 134 aa12.39□□□□□ -0.43
SREBF1-216ENST00000490796 ISOC2Q96AB3 205 aa12.38□□□□□ -0.43
SREBF1-216ENST00000490796 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
SREBF1-216ENST00000490796 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
SREBF1-216ENST00000490796 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
SREBF1-216ENST00000490796 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
SREBF1-216ENST00000490796 CAMPP49913 170 aa12.36□□□□□ -0.43
SREBF1-216ENST00000490796 COX7A2LO14548 114 aa12.35□□□□□ -0.43
SREBF1-216ENST00000490796 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
SREBF1-216ENST00000490796 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
SREBF1-216ENST00000490796 NAT8BQ9UHF3 227 aa12.35□□□□□ -0.43
SREBF1-216ENST00000490796 V9GYV3 84 aa12.35□□□□□ -0.43
SREBF1-216ENST00000490796 PPP1R2P9O14990 202 aa12.34□□□□□ -0.43
SREBF1-216ENST00000490796 TMEM241Q24JQ0 296 aa12.34□□□□□ -0.43
SREBF1-216ENST00000490796 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
SREBF1-216ENST00000490796 GAGE2BQ13066 116 aa12.33□□□□□ -0.44
SREBF1-216ENST00000490796 FAM74A3Q4VXF1 159 aa12.33□□□□□ -0.44
SREBF1-216ENST00000490796 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
SREBF1-216ENST00000490796 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
SREBF1-216ENST00000490796 ADIRFQ15847 76 aa12.32□□□□□ -0.44
SREBF1-216ENST00000490796 RNASE13Q5GAN3 156 aaKnown RBP12.32□□□□□ -0.44
SREBF1-216ENST00000490796 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
SREBF1-216ENST00000490796 CAMK2N2Q96S95 79 aa12.32□□□□□ -0.44
SREBF1-216ENST00000490796 CSDC2Q9Y534 153 aaKnown RBP12.32□□□□□ -0.44
SREBF1-216ENST00000490796 IGLV4-69A0A075B6H9 119 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 APOMO95445 188 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 SPINK6Q6UWN8 80 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 Q6ZRP5 223 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 NRACQ8N912 160 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
SREBF1-216ENST00000490796 PTTG1IPP53801 180 aa12.3□□□□□ -0.44
SREBF1-216ENST00000490796 CKS2P33552 79 aa12.29□□□□□ -0.44
SREBF1-216ENST00000490796 RPL23P62829 140 aaKnown RBP12.29□□□□□ -0.44
SREBF1-216ENST00000490796 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
SREBF1-216ENST00000490796 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
SREBF1-216ENST00000490796 C5orf38Q86SI9 138 aa12.29□□□□□ -0.44
SREBF1-216ENST00000490796 LINC00862A6NCI5 91 aa12.28□□□□□ -0.44
SREBF1-216ENST00000490796 TCAPO15273 167 aa12.28□□□□□ -0.44
SREBF1-216ENST00000490796 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
SREBF1-216ENST00000490796 NAT8Q9UHE5 227 aa12.28□□□□□ -0.44
SREBF1-216ENST00000490796 TNXBP22105 4242 aa12.28□□□□□ -0.44
SREBF1-216ENST00000490796 A0A1B0GW15 77 aa12.27□□□□□ -0.45
SREBF1-216ENST00000490796 Q6ZUT4 128 aa12.27□□□□□ -0.45
SREBF1-216ENST00000490796 C2orf48Q96LS8 159 aa12.27□□□□□ -0.45
SREBF1-216ENST00000490796 TIMM21Q9BVV7 248 aa12.27□□□□□ -0.45
SREBF1-216ENST00000490796 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
SREBF1-216ENST00000490796 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
SREBF1-216ENST00000490796 S100A8P05109 93 aa12.25□□□□□ -0.45
SREBF1-216ENST00000490796 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
SREBF1-216ENST00000490796 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
SREBF1-216ENST00000490796 PEA15Q15121 130 aa12.24□□□□□ -0.45
SREBF1-216ENST00000490796 F8W036 122 aa12.23□□□□□ -0.45
SREBF1-216ENST00000490796 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
SREBF1-216ENST00000490796 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
SREBF1-216ENST00000490796 RPL32P62910 135 aaKnown RBP12.22□□□□□ -0.45
SREBF1-216ENST00000490796 MRPL54Q6P161 138 aaKnown RBP12.22□□□□□ -0.45
SREBF1-216ENST00000490796 OR10D4PQ8NGN7 298 aa12.22□□□□□ -0.45
SREBF1-216ENST00000490796 A0A1W2PNN7 141 aa12.21□□□□□ -0.45
SREBF1-216ENST00000490796 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-216ENST00000490796 MT-ND6P03923 174 aa12.21□□□□□ -0.45
SREBF1-216ENST00000490796 RPL39P62891 51 aaKnown RBP12.21□□□□□ -0.45
SREBF1-216ENST00000490796 HBBP68871 147 aa12.21□□□□□ -0.45
SREBF1-216ENST00000490796 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-216ENST00000490796 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.45
SREBF1-216ENST00000490796 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-216ENST00000490796 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms