RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 LINC00959A0A1B0GUT2 108 aa17.6■□□□□ 0.41
HOXB3-211ENST00000490677 RPL23P62829 140 aaKnown RBP17.6■□□□□ 0.41
HOXB3-211ENST00000490677 PLAC8Q9NZF1 115 aa17.6■□□□□ 0.41
HOXB3-211ENST00000490677 SMKR1H3BMG3 65 aa17.59■□□□□ 0.41
HOXB3-211ENST00000490677 COX6A2Q02221 97 aa17.59■□□□□ 0.41
HOXB3-211ENST00000490677 NRACQ8N912 160 aa17.59■□□□□ 0.41
HOXB3-211ENST00000490677 CDC42SE2Q9NRR3 84 aa17.59■□□□□ 0.41
HOXB3-211ENST00000490677 PRSS3P2Q8NHM4 247 aa17.58■□□□□ 0.4
HOXB3-211ENST00000490677 TMEM241Q24JQ0 296 aa17.57■□□□□ 0.4
HOXB3-211ENST00000490677 CCL25O15444 150 aa17.56■□□□□ 0.4
HOXB3-211ENST00000490677 XCL1P47992 114 aa17.56■□□□□ 0.4
HOXB3-211ENST00000490677 SRSF3P84103 164 aaKnown RBP17.56■□□□□ 0.4
HOXB3-211ENST00000490677 RIGQ13278 110 aa17.56■□□□□ 0.4
HOXB3-211ENST00000490677 FAM74A3Q4VXF1 159 aa17.56■□□□□ 0.4
HOXB3-211ENST00000490677 BTF3L4Q96K17 158 aa17.56■□□□□ 0.4
HOXB3-211ENST00000490677 TMEM101Q96IK0 257 aa17.55■□□□□ 0.4
HOXB3-211ENST00000490677 C7orf77A4D0Y5 90 aa17.54■□□□□ 0.4
HOXB3-211ENST00000490677 ZNF664Q8N3J9 261 aa17.53■□□□□ 0.4
HOXB3-211ENST00000490677 NAT8BQ9UHF3 227 aa17.53■□□□□ 0.4
HOXB3-211ENST00000490677 SMIM27A0A1W2PRY6 76 aa17.52■□□□□ 0.4
HOXB3-211ENST00000490677 MT1HL1P0DM35 61 aa17.52■□□□□ 0.4
HOXB3-211ENST00000490677 LINC00526Q96FQ7 95 aa17.52■□□□□ 0.4
HOXB3-211ENST00000490677 NAT8Q9UHE5 227 aa17.52■□□□□ 0.4
HOXB3-211ENST00000490677 TNXBP22105 4242 aa17.51■□□□□ 0.39
HOXB3-211ENST00000490677 VCYO14598 125 aa17.51■□□□□ 0.39
HOXB3-211ENST00000490677 SUMO2P61956 95 aaKnown RBP17.51■□□□□ 0.39
HOXB3-211ENST00000490677 ADIRFQ15847 76 aa17.51■□□□□ 0.39
HOXB3-211ENST00000490677 MRPL51Q4U2R6 128 aaKnown RBP17.51■□□□□ 0.39
HOXB3-211ENST00000490677 FAM104BQ5XKR9 115 aa17.51■□□□□ 0.39
HOXB3-211ENST00000490677 DPH3Q96FX2 82 aa17.51■□□□□ 0.39
HOXB3-211ENST00000490677 IGHV1-58A0A0C4DH39 117 aa17.5■□□□□ 0.39
HOXB3-211ENST00000490677 SERTAD4-AS1Q5TG53 156 aa17.5■□□□□ 0.39
HOXB3-211ENST00000490677 CD164L2Q6UWJ8 174 aa17.5■□□□□ 0.39
HOXB3-211ENST00000490677 A0A096LNI7 61 aa17.49■□□□□ 0.39
HOXB3-211ENST00000490677 UBE2D4Q9Y2X8 147 aa17.49■□□□□ 0.39
HOXB3-211ENST00000490677 CSDC2Q9Y534 153 aaKnown RBP17.49■□□□□ 0.39
HOXB3-211ENST00000490677 IGKV2-24A0A0C4DH68 120 aa17.48■□□□□ 0.39
HOXB3-211ENST00000490677 PHOX2AO14813 284 aa17.48■□□□□ 0.39
HOXB3-211ENST00000490677 Q6ZRU5 148 aa17.48■□□□□ 0.39
HOXB3-211ENST00000490677 SS18Q15532 418 aa17.47■□□□□ 0.39
HOXB3-211ENST00000490677 MAJINQ3KP22 176 aa17.47■□□□□ 0.39
HOXB3-211ENST00000490677 PPP1R17O96001 155 aa17.46■□□□□ 0.39
HOXB3-211ENST00000490677 TRBV24-1A0A075B6N3 115 aa17.44■□□□□ 0.38
HOXB3-211ENST00000490677 FCER1GP30273 86 aa17.44■□□□□ 0.38
HOXB3-211ENST00000490677 STPG4Q8N801 248 aa17.44■□□□□ 0.38
HOXB3-211ENST00000490677 SMDT1Q9H4I9 107 aa17.44■□□□□ 0.38
HOXB3-211ENST00000490677 PPP1R2P9O14990 202 aa17.43■□□□□ 0.38
HOXB3-211ENST00000490677 CAMPP49913 170 aa17.43■□□□□ 0.38
HOXB3-211ENST00000490677 PEA15Q15121 130 aa17.43■□□□□ 0.38
HOXB3-211ENST00000490677 RNASE13Q5GAN3 156 aaKnown RBP17.43■□□□□ 0.38
HOXB3-211ENST00000490677 FAM104AQ969W3 186 aa17.43■□□□□ 0.38
HOXB3-211ENST00000490677 RPL32P62910 135 aaKnown RBP17.42■□□□□ 0.38
HOXB3-211ENST00000490677 CARD19Q96LW7 228 aa17.42■□□□□ 0.38
HOXB3-211ENST00000490677 KIR2DL4Q99706 377 aa17.42■□□□□ 0.38
HOXB3-211ENST00000490677 C20orf78Q9BR46 151 aa17.42■□□□□ 0.38
HOXB3-211ENST00000490677 A0A1B0GXF2 115 aa17.41■□□□□ 0.38
HOXB3-211ENST00000490677 LINC00862A6NCI5 91 aa17.41■□□□□ 0.38
HOXB3-211ENST00000490677 Q6ZUT4 128 aa17.41■□□□□ 0.38
HOXB3-211ENST00000490677 TIMM21Q9BVV7 248 aa17.41■□□□□ 0.38
HOXB3-211ENST00000490677 UBR4Q5T4S7 5183 aa17.4■□□□□ 0.38
HOXB3-211ENST00000490677 A0A1B0GW15 77 aa17.4■□□□□ 0.38
HOXB3-211ENST00000490677 C1orf196B1AJZ1 125 aa17.4■□□□□ 0.38
HOXB3-211ENST00000490677 SYCNQ0VAF6 134 aa17.39■□□□□ 0.37
HOXB3-211ENST00000490677 C7orf33Q8WU49 177 aa17.39■□□□□ 0.37
HOXB3-211ENST00000490677 PRR3P79522 188 aaKnown RBP17.38■□□□□ 0.37
HOXB3-211ENST00000490677 ZNF561-AS1K7EIQ3 104 aa17.37■□□□□ 0.37
HOXB3-211ENST00000490677 TNFRSF6BO95407 300 aa17.37■□□□□ 0.37
HOXB3-211ENST00000490677 CKS2P33552 79 aa17.37■□□□□ 0.37
HOXB3-211ENST00000490677 MRPL54Q6P161 138 aaKnown RBP17.37■□□□□ 0.37
HOXB3-211ENST00000490677 IGLV4-69A0A075B6H9 119 aa17.36■□□□□ 0.37
HOXB3-211ENST00000490677 RPL39P62891 51 aaKnown RBP17.36■□□□□ 0.37
HOXB3-211ENST00000490677 TRAV13-1A0A0B4J241 112 aa17.35■□□□□ 0.37
HOXB3-211ENST00000490677 COX7A2LO14548 114 aa17.35■□□□□ 0.37
HOXB3-211ENST00000490677 SMAGPQ0VAQ4 97 aa17.35■□□□□ 0.37
HOXB3-211ENST00000490677 SMIM2Q9BVW6 85 aa17.35■□□□□ 0.37
HOXB3-211ENST00000490677 LINC00474Q9P2X8 69 aa17.35■□□□□ 0.37
HOXB3-211ENST00000490677 D6R8Y8 96 aa17.34■□□□□ 0.37
HOXB3-211ENST00000490677 NPYP01303 97 aa17.34■□□□□ 0.37
HOXB3-211ENST00000490677 HBBP68871 147 aa17.34■□□□□ 0.37
HOXB3-211ENST00000490677 PLA2G2DQ9UNK4 145 aa17.32■□□□□ 0.36
HOXB3-211ENST00000490677 PKIGQ9Y2B9 76 aa17.32■□□□□ 0.36
HOXB3-211ENST00000490677 PTTG1IPP53801 180 aa17.31■□□□□ 0.36
HOXB3-211ENST00000490677 C5orf38Q86SI9 138 aa17.31■□□□□ 0.36
HOXB3-211ENST00000490677 TMEM18Q96B42 140 aa17.31■□□□□ 0.36
HOXB3-211ENST00000490677 MALP21145 153 aa17.3■□□□□ 0.36
HOXB3-211ENST00000490677 OPRPNQ99935 248 aaPredicted RBP17.3■□□□□ 0.36
HOXB3-211ENST00000490677 F8W036 122 aa17.29■□□□□ 0.36
HOXB3-211ENST00000490677 TCAPO15273 167 aa17.29■□□□□ 0.36
HOXB3-211ENST00000490677 S100A8P05109 93 aa17.29■□□□□ 0.36
HOXB3-211ENST00000490677 LOC107984640A0A0U1RRK4 108 aa17.28■□□□□ 0.36
HOXB3-211ENST00000490677 C2orf48Q96LS8 159 aa17.28■□□□□ 0.36
HOXB3-211ENST00000490677 SPANXA1Q9NS26 97 aa17.27■□□□□ 0.36
HOXB3-211ENST00000490677 IGHV3OR16-9A0A0B4J2B5 98 aa17.26■□□□□ 0.35
HOXB3-211ENST00000490677 PPBPP02775 128 aa17.26■□□□□ 0.35
HOXB3-211ENST00000490677 MRPS36P82909 103 aaKnown RBP17.26■□□□□ 0.35
HOXB3-211ENST00000490677 CAMK2N2Q96S95 79 aa17.26■□□□□ 0.35
HOXB3-211ENST00000490677 A0A1W2PNN7 141 aa17.25■□□□□ 0.35
HOXB3-211ENST00000490677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.25■□□□□ 0.35
HOXB3-211ENST00000490677 ATP5L2Q7Z4Y8 100 aa17.25■□□□□ 0.35
HOXB3-211ENST00000490677 APOMO95445 188 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms