RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	KRTAP17-1	Q9BYP8	105 aa		12.18	□□□□□ -0.46
C4A-256	ENST00000490663	S100P	P25815	95 aa		12.17	□□□□□ -0.46
C4A-256	ENST00000490663	RHEB	Q15382	184 aa		12.17	□□□□□ -0.46
C4A-256	ENST00000490663	NTN5	Q8WTR8	489 aa	Predicted RBP	12.17	□□□□□ -0.46
C4A-256	ENST00000490663	TMEM101	Q96IK0	257 aa		12.17	□□□□□ -0.46
C4A-256	ENST00000490663	HSPG2	P98160	4391 aa		12.17	□□□□□ -0.46
C4A-256	ENST00000490663	GAGE12H	A6NDE8	117 aa		12.16	□□□□□ -0.46
C4A-256	ENST00000490663	ZNF25	P17030	456 aa	Predicted RBP	12.16	□□□□□ -0.46
C4A-256	ENST00000490663	RPL32	P62910	135 aa	Known RBP	12.16	□□□□□ -0.46
C4A-256	ENST00000490663	PHOX2A	O14813	284 aa		12.15	□□□□□ -0.46
C4A-256	ENST00000490663		Q6ZUT4	128 aa		12.15	□□□□□ -0.46
C4A-256	ENST00000490663	MRPL52	Q86TS9	123 aa	Known RBP	12.15	□□□□□ -0.46
C4A-256	ENST00000490663	UBE2D4	Q9Y2X8	147 aa		12.15	□□□□□ -0.46
C4A-256	ENST00000490663	TRAV9-1	A0A075B6T8	112 aa		12.14	□□□□□ -0.47
C4A-256	ENST00000490663	TRAV8-4	A0A0B4J246	113 aa		12.14	□□□□□ -0.47
C4A-256	ENST00000490663	DGAT2L7P	Q6IED9	249 aa		12.14	□□□□□ -0.47
C4A-256	ENST00000490663	SLC7A5P1	Q8MH63	180 aa		12.14	□□□□□ -0.47
C4A-256	ENST00000490663	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.14	□□□□□ -0.47
C4A-256	ENST00000490663	MAP1LC3A	Q9H492	121 aa		12.14	□□□□□ -0.47
C4A-256	ENST00000490663	CDK2AP2	O75956	126 aa		12.13	□□□□□ -0.47
C4A-256	ENST00000490663	PRSS1	P07477	247 aa		12.13	□□□□□ -0.47
C4A-256	ENST00000490663	ZNF664	Q8N3J9	261 aa		12.13	□□□□□ -0.47
C4A-256	ENST00000490663	OPRPN	Q99935	248 aa	Predicted RBP	12.13	□□□□□ -0.47
C4A-256	ENST00000490663	CDC42SE2	Q9NRR3	84 aa		12.13	□□□□□ -0.47
C4A-256	ENST00000490663	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.12	□□□□□ -0.47
C4A-256	ENST00000490663	LINC00959	A0A1B0GUT2	108 aa		12.11	□□□□□ -0.47
C4A-256	ENST00000490663	CCL25	O15444	150 aa		12.11	□□□□□ -0.47
C4A-256	ENST00000490663	XCL1	P47992	114 aa		12.11	□□□□□ -0.47
C4A-256	ENST00000490663	NDUFA5	Q16718	116 aa		12.11	□□□□□ -0.47
C4A-256	ENST00000490663	FAM30A	Q9NZY2	134 aa		12.11	□□□□□ -0.47
C4A-256	ENST00000490663	SVBP	Q8N300	66 aa		12.1	□□□□□ -0.47
C4A-256	ENST00000490663	LAMTOR2	Q9Y2Q5	125 aa		12.1	□□□□□ -0.47
C4A-256	ENST00000490663	SNAPIN	O95295	136 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	RAB5A	P20339	215 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	XG	P55808	180 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	C14orf177	Q52M58	125 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663		Q8N8P6	123 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	C15orf56	Q8N910	161 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	FAM104A	Q969W3	186 aa		12.09	□□□□□ -0.47
C4A-256	ENST00000490663	hDV102S1	A0JD36	115 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	PRSS47	A8MTI9	375 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	IFI27	P40305	119 aa	Predicted RBP	12.08	□□□□□ -0.48
C4A-256	ENST00000490663	FOXI1	Q12951	378 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	HIGD2B	Q4VC39	106 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	TMEM18	Q96B42	140 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	GNB1L	Q9BYB4	327 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	MRPL18	Q9H0U6	180 aa	Known RBP	12.08	□□□□□ -0.48
C4A-256	ENST00000490663	DNAH8	Q96JB1	4490 aa		12.08	□□□□□ -0.48
C4A-256	ENST00000490663	TRAV13-1	A0A0B4J241	112 aa		12.07	□□□□□ -0.48
C4A-256	ENST00000490663	KRTAP4-5	Q9BYR2	181 aa		12.07	□□□□□ -0.48
C4A-256	ENST00000490663	SS18	Q15532	418 aa		12.06	□□□□□ -0.48
C4A-256	ENST00000490663	TIMM21	Q9BVV7	248 aa		12.06	□□□□□ -0.48
C4A-256	ENST00000490663	SMAGP	Q0VAQ4	97 aa		12.05	□□□□□ -0.48
C4A-256	ENST00000490663	FABP9	Q0Z7S8	132 aa		12.05	□□□□□ -0.48
C4A-256	ENST00000490663	CSDC2	Q9Y534	153 aa	Known RBP	12.05	□□□□□ -0.48
C4A-256	ENST00000490663	ZC2HC1B	Q5TFG8	222 aa		12.04	□□□□□ -0.48
C4A-256	ENST00000490663	LINC00526	Q96FQ7	95 aa		12.04	□□□□□ -0.48
C4A-256	ENST00000490663	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.04	□□□□□ -0.48
C4A-256	ENST00000490663	SPANXA1	Q9NS26	97 aa		12.04	□□□□□ -0.48
C4A-256	ENST00000490663	SLPI	P03973	132 aa		12.03	□□□□□ -0.48
C4A-256	ENST00000490663	CBLN2	Q8IUK8	224 aa		12.03	□□□□□ -0.48
C4A-256	ENST00000490663	IGLV4-3	A0A075B6K6	122 aa		12.02	□□□□□ -0.49
C4A-256	ENST00000490663	SMR3B	P02814	79 aa	Predicted RBP	12.02	□□□□□ -0.49
C4A-256	ENST00000490663	C2orf66	Q6UXQ4	117 aa		12.02	□□□□□ -0.49
C4A-256	ENST00000490663	NXT2	Q9NPJ8	142 aa	Known RBP	12.02	□□□□□ -0.49
C4A-256	ENST00000490663	MT-ND6	P03923	174 aa		12.01	□□□□□ -0.49
C4A-256	ENST00000490663	COX19	Q49B96	90 aa		12.01	□□□□□ -0.49
C4A-256	ENST00000490663	CYSLTR1	Q9Y271	337 aa		12.01	□□□□□ -0.49
C4A-256	ENST00000490663	TRAPPC1	Q9Y5R8	145 aa		12.01	□□□□□ -0.49
C4A-256	ENST00000490663	IFITM10	A6NMD0	228 aa		12	□□□□□ -0.49
C4A-256	ENST00000490663	MRPS36	P82909	103 aa	Known RBP	12	□□□□□ -0.49
C4A-256	ENST00000490663	ORMDL2	Q53FV1	153 aa		12	□□□□□ -0.49
C4A-256	ENST00000490663	CD164L2	Q6UWJ8	174 aa		12	□□□□□ -0.49
C4A-256	ENST00000490663	PRSS3P2	Q8NHM4	247 aa		12	□□□□□ -0.49
C4A-256	ENST00000490663	YPEL4	Q96NS1	127 aa		12	□□□□□ -0.49
C4A-256	ENST00000490663	C1orf196	B1AJZ1	125 aa		11.99	□□□□□ -0.49
C4A-256	ENST00000490663		Q6ZSA8	131 aa		11.99	□□□□□ -0.49
C4A-256	ENST00000490663	C5orf38	Q86SI9	138 aa		11.99	□□□□□ -0.49
C4A-256	ENST00000490663	AP5S1	Q9NUS5	200 aa		11.99	□□□□□ -0.49
C4A-256	ENST00000490663	C9orf163	Q8N9P6	203 aa		11.98	□□□□□ -0.49
C4A-256	ENST00000490663	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.97	□□□□□ -0.49
C4A-256	ENST00000490663	CFAP161	Q6P656	301 aa		11.97	□□□□□ -0.49
C4A-256	ENST00000490663	LINC00173	Q6ZV60	143 aa		11.97	□□□□□ -0.49
C4A-256	ENST00000490663		Q8N1X5	172 aa		11.97	□□□□□ -0.49
C4A-256	ENST00000490663	TMEM141	Q96I45	108 aa		11.97	□□□□□ -0.49
C4A-256	ENST00000490663	PYGO1	Q9Y3Y4	419 aa		11.97	□□□□□ -0.49
C4A-256	ENST00000490663	IGHV1-58	A0A0C4DH39	117 aa		11.96	□□□□□ -0.49
C4A-256	ENST00000490663	PANO1	I0J062	215 aa		11.96	□□□□□ -0.49
C4A-256	ENST00000490663	COX7A2L	O14548	114 aa		11.96	□□□□□ -0.49
C4A-256	ENST00000490663	CNBP	P62633	177 aa	Known RBP	11.96	□□□□□ -0.49
C4A-256	ENST00000490663	SCX	Q7RTU7	201 aa		11.96	□□□□□ -0.49
C4A-256	ENST00000490663	MAL	P21145	153 aa		11.95	□□□□□ -0.5
C4A-256	ENST00000490663		K7EMI3	77 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	COX6A2	Q02221	97 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	FA2H	Q7L5A8	372 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	C18orf32	Q8TCD1	76 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	URB1-AS1	Q96HZ7	61 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.94	□□□□□ -0.5
C4A-256	ENST00000490663	ABCA13	Q86UQ4	5058 aa		11.94	□□□□□ -0.5
C4A-256	ENST00000490663	IGIP	A6NJ69	53 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms