RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 NUP35Q8NFH5 326 aa11.96□□□□□ -0.49
UPK3B-205ENST00000490360 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
UPK3B-205ENST00000490360 MRAP2Q96G30 205 aa11.96□□□□□ -0.49
UPK3B-205ENST00000490360 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
UPK3B-205ENST00000490360 ZNF345Q14585 488 aa11.95□□□□□ -0.5
UPK3B-205ENST00000490360 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
UPK3B-205ENST00000490360 CAMK2N2Q96S95 79 aa11.95□□□□□ -0.5
UPK3B-205ENST00000490360 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
UPK3B-205ENST00000490360 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
UPK3B-205ENST00000490360 H0Y9J4 135 aa11.94□□□□□ -0.5
UPK3B-205ENST00000490360 BCL2P10415 239 aa11.94□□□□□ -0.5
UPK3B-205ENST00000490360 ESDP10768 282 aa11.94□□□□□ -0.5
UPK3B-205ENST00000490360 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
UPK3B-205ENST00000490360 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 COX7A2LO14548 114 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 PDE6DO43924 150 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 PRR4Q16378 134 aa11.93□□□□□ -0.5
UPK3B-205ENST00000490360 TRAV1-1A0A0B4J248 108 aa11.92□□□□□ -0.5
UPK3B-205ENST00000490360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.92□□□□□ -0.5
UPK3B-205ENST00000490360 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
UPK3B-205ENST00000490360 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
UPK3B-205ENST00000490360 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
UPK3B-205ENST00000490360 NUDT10Q8NFP7 164 aa11.92□□□□□ -0.5
UPK3B-205ENST00000490360 NUDT11Q96G61 164 aa11.92□□□□□ -0.5
UPK3B-205ENST00000490360 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
UPK3B-205ENST00000490360 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
UPK3B-205ENST00000490360 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
UPK3B-205ENST00000490360 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
UPK3B-205ENST00000490360 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
UPK3B-205ENST00000490360 BCL2L11O43521 198 aa11.89□□□□□ -0.51
UPK3B-205ENST00000490360 UBE2D1P51668 147 aa11.89□□□□□ -0.51
UPK3B-205ENST00000490360 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
UPK3B-205ENST00000490360 TRBV20OR9-2A0A075B6H5 130 aa11.88□□□□□ -0.51
UPK3B-205ENST00000490360 A0A087WZ39 114 aa11.88□□□□□ -0.51
UPK3B-205ENST00000490360 TSHBP01222 138 aa11.88□□□□□ -0.51
UPK3B-205ENST00000490360 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
UPK3B-205ENST00000490360 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
UPK3B-205ENST00000490360 C7orf77A4D0Y5 90 aa11.87□□□□□ -0.51
UPK3B-205ENST00000490360 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
UPK3B-205ENST00000490360 KRTAP9-6A0A140TA67 174 aa11.86□□□□□ -0.51
UPK3B-205ENST00000490360 F8WDY8 70 aa11.86□□□□□ -0.51
UPK3B-205ENST00000490360 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
UPK3B-205ENST00000490360 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
UPK3B-205ENST00000490360 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
UPK3B-205ENST00000490360 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
UPK3B-205ENST00000490360 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
UPK3B-205ENST00000490360 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
UPK3B-205ENST00000490360 OR10D4PQ8NGN7 298 aa11.84□□□□□ -0.51
UPK3B-205ENST00000490360 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
UPK3B-205ENST00000490360 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
UPK3B-205ENST00000490360 LCE2AQ5TA79 106 aaPredicted RBP11.83□□□□□ -0.52
UPK3B-205ENST00000490360 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
UPK3B-205ENST00000490360 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
UPK3B-205ENST00000490360 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
UPK3B-205ENST00000490360 SPAG11BQ08648 103 aa11.82□□□□□ -0.52
UPK3B-205ENST00000490360 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
UPK3B-205ENST00000490360 TLX1NBP0CAT3 122 aa11.8□□□□□ -0.52
UPK3B-205ENST00000490360 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
UPK3B-205ENST00000490360 TMEM241Q24JQ0 296 aa11.8□□□□□ -0.52
UPK3B-205ENST00000490360 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
UPK3B-205ENST00000490360 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
UPK3B-205ENST00000490360 A8MWL6 223 aa11.79□□□□□ -0.52
UPK3B-205ENST00000490360 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
UPK3B-205ENST00000490360 VCYO14598 125 aa11.79□□□□□ -0.52
UPK3B-205ENST00000490360 FCER1GP30273 86 aa11.79□□□□□ -0.52
UPK3B-205ENST00000490360 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
UPK3B-205ENST00000490360 NDUFA1O15239 70 aa11.78□□□□□ -0.52
UPK3B-205ENST00000490360 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
UPK3B-205ENST00000490360 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
UPK3B-205ENST00000490360 K7EN84 100 aa11.77□□□□□ -0.53
UPK3B-205ENST00000490360 PPP1R17O96001 155 aa11.77□□□□□ -0.53
UPK3B-205ENST00000490360 TMEM191AQ9H0A3 160 aa11.77□□□□□ -0.53
UPK3B-205ENST00000490360 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
UPK3B-205ENST00000490360 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
UPK3B-205ENST00000490360 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
UPK3B-205ENST00000490360 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
UPK3B-205ENST00000490360 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
UPK3B-205ENST00000490360 UBE2BP63146 152 aa11.75□□□□□ -0.53
UPK3B-205ENST00000490360 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
UPK3B-205ENST00000490360 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
UPK3B-205ENST00000490360 ORAOV1Q8WV07 137 aa11.75□□□□□ -0.53
UPK3B-205ENST00000490360 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
UPK3B-205ENST00000490360 CT83Q5H943 113 aa11.74□□□□□ -0.53
UPK3B-205ENST00000490360 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
UPK3B-205ENST00000490360 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
UPK3B-205ENST00000490360 M0QXV9 152 aa11.72□□□□□ -0.53
UPK3B-205ENST00000490360 RAB4AP20338 218 aa11.72□□□□□ -0.53
UPK3B-205ENST00000490360 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
UPK3B-205ENST00000490360 Q6ZUT4 128 aa11.71□□□□□ -0.53
UPK3B-205ENST00000490360 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
UPK3B-205ENST00000490360 SUMO2P61956 95 aaKnown RBP11.7□□□□□ -0.54
UPK3B-205ENST00000490360 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
UPK3B-205ENST00000490360 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
UPK3B-205ENST00000490360 PPP1R2P9O14990 202 aa11.69□□□□□ -0.54
UPK3B-205ENST00000490360 ZNF861PO60384 105 aa11.69□□□□□ -0.54
UPK3B-205ENST00000490360 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
UPK3B-205ENST00000490360 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
UPK3B-205ENST00000490360 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms