RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
TNFRSF1B-202ENST00000489921 PHOX2AO14813 284 aa12.21□□□□□ -0.45
TNFRSF1B-202ENST00000489921 CCL25O15444 150 aa12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 XCL1P47992 114 aa12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 AMN1Q8IY45 258 aa12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 CDC42SE2Q9NRR3 84 aa12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 V9GYV3 84 aa12.2□□□□□ -0.46
TNFRSF1B-202ENST00000489921 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 LINC00526Q96FQ7 95 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 PLA2G2DQ9UNK4 145 aa12.19□□□□□ -0.46
TNFRSF1B-202ENST00000489921 A0A096LNI7 61 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 SMKR1H3BMG3 65 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 NUP35Q8NFH5 326 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 BTF3L4Q96K17 158 aa12.18□□□□□ -0.46
TNFRSF1B-202ENST00000489921 NRACQ8N912 160 aa12.17□□□□□ -0.46
TNFRSF1B-202ENST00000489921 ZNF664Q8N3J9 261 aa12.16□□□□□ -0.46
TNFRSF1B-202ENST00000489921 STPG4Q8N801 248 aa12.16□□□□□ -0.46
TNFRSF1B-202ENST00000489921 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
TNFRSF1B-202ENST00000489921 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
TNFRSF1B-202ENST00000489921 C9JQL5 133 aa12.15□□□□□ -0.46
TNFRSF1B-202ENST00000489921 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
TNFRSF1B-202ENST00000489921 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
TNFRSF1B-202ENST00000489921 C7orf77A4D0Y5 90 aa12.14□□□□□ -0.47
TNFRSF1B-202ENST00000489921 SS18Q15532 418 aa12.14□□□□□ -0.47
TNFRSF1B-202ENST00000489921 VCYO14598 125 aa12.13□□□□□ -0.47
TNFRSF1B-202ENST00000489921 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1B-202ENST00000489921 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1B-202ENST00000489921 RIGQ13278 110 aa12.13□□□□□ -0.47
TNFRSF1B-202ENST00000489921 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
TNFRSF1B-202ENST00000489921 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
TNFRSF1B-202ENST00000489921 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1B-202ENST00000489921 A0A1B0GVG6 124 aa12.11□□□□□ -0.47
TNFRSF1B-202ENST00000489921 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1B-202ENST00000489921 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1B-202ENST00000489921 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
TNFRSF1B-202ENST00000489921 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1B-202ENST00000489921 FAM104BQ5XKR9 115 aa12.1□□□□□ -0.47
TNFRSF1B-202ENST00000489921 NAT8BQ9UHF3 227 aa12.1□□□□□ -0.47
TNFRSF1B-202ENST00000489921 SMIM27A0A1W2PRY6 76 aa12.09□□□□□ -0.47
TNFRSF1B-202ENST00000489921 SYCNQ0VAF6 134 aa12.09□□□□□ -0.47
TNFRSF1B-202ENST00000489921 FAM74A3Q4VXF1 159 aa12.09□□□□□ -0.47
TNFRSF1B-202ENST00000489921 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1B-202ENST00000489921 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
TNFRSF1B-202ENST00000489921 C1orf196B1AJZ1 125 aa12.08□□□□□ -0.48
TNFRSF1B-202ENST00000489921 PPP1R17O96001 155 aa12.08□□□□□ -0.48
TNFRSF1B-202ENST00000489921 FCER1GP30273 86 aa12.08□□□□□ -0.48
TNFRSF1B-202ENST00000489921 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
TNFRSF1B-202ENST00000489921 LRP2P98164 4655 aa12.08□□□□□ -0.48
TNFRSF1B-202ENST00000489921 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
TNFRSF1B-202ENST00000489921 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
TNFRSF1B-202ENST00000489921 CAMPP49913 170 aa12.07□□□□□ -0.48
TNFRSF1B-202ENST00000489921 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
TNFRSF1B-202ENST00000489921 TRBV24-1A0A075B6N3 115 aa12.06□□□□□ -0.48
TNFRSF1B-202ENST00000489921 ADIRFQ15847 76 aa12.06□□□□□ -0.48
TNFRSF1B-202ENST00000489921 Q6ZUT4 128 aa12.06□□□□□ -0.48
TNFRSF1B-202ENST00000489921 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
TNFRSF1B-202ENST00000489921 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
TNFRSF1B-202ENST00000489921 COX7A2LO14548 114 aa12.05□□□□□ -0.48
TNFRSF1B-202ENST00000489921 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
TNFRSF1B-202ENST00000489921 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
TNFRSF1B-202ENST00000489921 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
TNFRSF1B-202ENST00000489921 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
TNFRSF1B-202ENST00000489921 LINC00862A6NCI5 91 aa12.04□□□□□ -0.48
TNFRSF1B-202ENST00000489921 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1B-202ENST00000489921 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
TNFRSF1B-202ENST00000489921 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
TNFRSF1B-202ENST00000489921 RPL39P62891 51 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1B-202ENST00000489921 ODF1Q14990 250 aa12.03□□□□□ -0.48
TNFRSF1B-202ENST00000489921 PKIGQ9Y2B9 76 aa12.03□□□□□ -0.48
TNFRSF1B-202ENST00000489921 A0A1W2PNN7 141 aa12.02□□□□□ -0.49
TNFRSF1B-202ENST00000489921 MALP21145 153 aa12.02□□□□□ -0.49
TNFRSF1B-202ENST00000489921 C5orf38Q86SI9 138 aa12.02□□□□□ -0.49
TNFRSF1B-202ENST00000489921 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 A0A1B0GW15 77 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 TNFRSF6BO95407 300 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 CKS2P33552 79 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
TNFRSF1B-202ENST00000489921 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 KRTAP10-8P60410 259 aa12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 GAGE2BQ13066 116 aa12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 SPINK6Q6UWN8 80 aa12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 C2orf48Q96LS8 159 aa12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
TNFRSF1B-202ENST00000489921 D6R8Y8 96 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 PEA15Q15121 130 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 Q6ZRP5 223 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 TMEM18Q96B42 140 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 SMIM2Q9BVW6 85 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
TNFRSF1B-202ENST00000489921 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
TNFRSF1B-202ENST00000489921 NPYP01303 97 aa11.98□□□□□ -0.49
TNFRSF1B-202ENST00000489921 MRPL54Q6P161 138 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms