RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TCL1BO95988 128 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 CD3DP04234 171 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 METTL15P1P0C7V9 234 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 SLC25A4P12235 298 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 HLA-DRB4P13762 266 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 EFNA4P52798 201 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 SNRPGP62308 76 aaKnown RBP1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 CCL8P80075 99 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 SS18Q15532 418 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 MEIG1Q5JSS6 88 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 C1orf134Q5TEV5 83 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 OR2T2Q6IF00 324 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 DPPA3Q6W0C5 159 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 OR10AC1Q8NH08 325 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 OTOSQ8NHW6 89 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 C10orf105Q8TEF2 133 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 CLEC2BQ92478 149 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 DPH3Q96FX2 82 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 CCL19Q99731 98 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 TCEAL7Q9BRU2 100 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 DUSP21Q9H596 190 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 HHLA3Q9XRX5 114 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 SOX21Q9Y651 276 aaPredicted RBP1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 HLA-DRB4X5D2U9 266 aa1.76□□□□□ -2.13
DEPDC1-204ENST00000489862 IGLV2-18A0A075B6J9 118 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 TRAV1-1A0A0B4J248 108 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 C20orf202A1L168 122 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 A6NIN4 97 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 H3BSH0 61 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 UQCRQO14949 82 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 HBDP02042 147 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 FGF7P21781 194 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 SLC35E3Q7Z769 313 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 OR5AS1Q8N127 324 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 FAM216BQ8N7L0 139 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 OR4C12Q96R67 309 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 NABP2Q9BQ15 211 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 REG4Q9BYZ8 158 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 BPESC1Q9GZL8 116 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 TPRKBQ9Y3C4 175 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 NBEAL1Q6ZS30 2694 aa1.75□□□□□ -2.13
DEPDC1-204ENST00000489862 TANC2Q9HCD6 1990 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 A0A0D9SG52 128 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 OR2T8A6NH00 312 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 A6NN06 94 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 IQCF6A8MYZ5 107 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 M0R135 149 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 PIN1P1O15428 100 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 ZNF705BP0CI00 300 aaPredicted RBP1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 MGST1P10620 155 aaKnown RBP1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 FABP4P15090 132 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 ZNF93P35789 620 aaPredicted RBP1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 PCBD1P61457 104 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 BLCAPP62952 87 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 INSL4Q14641 139 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 ESRGQ1W209 222 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 TCTEX1D1Q8N7M0 179 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 DOCK11Q5JSL3 2073 aa1.74□□□□□ -2.13
DEPDC1-204ENST00000489862 TMSB15BA0A087X1C1 80 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 M0R233 179 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 SDCBPO00560 298 aaPredicted RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 PIPP12273 146 aaPredicted RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 HIST1H1DP16402 221 aaKnown RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 FUSP35637 526 aaKnown RBP eCLIP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 FXYD2P54710 66 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 PRB3Q04118 309 aaPredicted RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 TMEM155Q4W5P6 130 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 FAM19A2Q8N3H0 131 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 PP6455Q8WZ26 134 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 CIB3Q96Q77 187 aaPredicted RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 TMEM106BQ9NUM4 274 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 R4GMQ9 66 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 V9GYS6 101 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 IGKV1D-17A0A075B6S4 117 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 J3QLW9 94 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 SYNGR2O43760 224 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 NCR2O95944 276 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 GUCA1AP43080 201 aaPredicted RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 ZNF345Q14585 488 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 HCP5Q6MZN7 132 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 LINC00299Q6ZSB3 139 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 ACBD7Q8N6N7 88 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 DEFB108BQ8NET1 73 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 LSM10Q969L4 123 aaKnown RBP1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 SPTSSAQ969W0 71 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 DYNLRB1Q9NP97 96 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 FAIMQ9NVQ4 179 aa1.73□□□□□ -2.13
DEPDC1-204ENST00000489862 MEGF8Q7Z7M0 2845 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 PRKDCP78527 4128 aaKnown RBP1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 MGAM2Q2M2H8 2515 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 LOC107986453A0A1B0GWG9 222 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 C7orf71A4D174 169 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 IBA57-AS1B1ANH7 110 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 SNAPC5O75971 98 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 PMP2P02689 132 aa1.72□□□□□ -2.13
DEPDC1-204ENST00000489862 GYPAP02724 150 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms