RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 GAGE12HA6NDE8 117 aa12.43□□□□□ -0.42
EPHB4-207ENST00000489808 PPBPP02775 128 aa12.43□□□□□ -0.42
EPHB4-207ENST00000489808 ADCYAP1P18509 176 aa12.43□□□□□ -0.42
EPHB4-207ENST00000489808 OR5A1Q8NGJ0 315 aa12.43□□□□□ -0.42
EPHB4-207ENST00000489808 EPM2AB3EWF7 344 aa12.42□□□□□ -0.42
EPHB4-207ENST00000489808 SMR3BP02814 79 aaPredicted RBP12.42□□□□□ -0.42
EPHB4-207ENST00000489808 CHCHD10Q8WYQ3 142 aaPredicted RBP12.42□□□□□ -0.42
EPHB4-207ENST00000489808 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
EPHB4-207ENST00000489808 PHOX2AO14813 284 aa12.41□□□□□ -0.42
EPHB4-207ENST00000489808 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
EPHB4-207ENST00000489808 NPYP01303 97 aa12.4□□□□□ -0.42
EPHB4-207ENST00000489808 ZNF664Q8N3J9 261 aa12.4□□□□□ -0.42
EPHB4-207ENST00000489808 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 TCAPO15273 167 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 ORMDL3Q8N138 153 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 IMMP2LQ96T52 175 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 SMIM2Q9BVW6 85 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
EPHB4-207ENST00000489808 CSDC2Q9Y534 153 aaKnown RBP12.39□□□□□ -0.43
EPHB4-207ENST00000489808 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
EPHB4-207ENST00000489808 FOXI1Q12951 378 aa12.37□□□□□ -0.43
EPHB4-207ENST00000489808 TMEM18Q96B42 140 aa12.37□□□□□ -0.43
EPHB4-207ENST00000489808 PRELID3AQ96N28 172 aa12.37□□□□□ -0.43
EPHB4-207ENST00000489808 CTDSP1Q9GZU7 261 aa12.37□□□□□ -0.43
EPHB4-207ENST00000489808 SLPIP03973 132 aa12.36□□□□□ -0.43
EPHB4-207ENST00000489808 CNBPP62633 177 aaKnown RBP12.36□□□□□ -0.43
EPHB4-207ENST00000489808 Q5VSD8 79 aa12.36□□□□□ -0.43
EPHB4-207ENST00000489808 TIMM21Q9BVV7 248 aa12.36□□□□□ -0.43
EPHB4-207ENST00000489808 AP5S1Q9NUS5 200 aa12.36□□□□□ -0.43
EPHB4-207ENST00000489808 PRSS47A8MTI9 375 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 CCL25O15444 150 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 XCL1P47992 114 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 SS18Q15532 418 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 C15orf56Q8N910 161 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
EPHB4-207ENST00000489808 VPS13BQ7Z7G8 4022 aa12.34□□□□□ -0.43
EPHB4-207ENST00000489808 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
EPHB4-207ENST00000489808 LAMTOR2Q9Y2Q5 125 aa12.34□□□□□ -0.43
EPHB4-207ENST00000489808 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
EPHB4-207ENST00000489808 SDIM1Q6ZPB5 146 aa12.33□□□□□ -0.44
EPHB4-207ENST00000489808 RAB5AP20339 215 aa12.32□□□□□ -0.44
EPHB4-207ENST00000489808 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
EPHB4-207ENST00000489808 CD164L2Q6UWJ8 174 aa12.32□□□□□ -0.44
EPHB4-207ENST00000489808 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
EPHB4-207ENST00000489808 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
EPHB4-207ENST00000489808 C1orf196B1AJZ1 125 aa12.31□□□□□ -0.44
EPHB4-207ENST00000489808 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
EPHB4-207ENST00000489808 TRAV9-1A0A075B6T8 112 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 Q6ZUT4 128 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 FAM104AQ969W3 186 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
EPHB4-207ENST00000489808 GVQW2A0A096LPI5 108 aaPredicted RBP12.29□□□□□ -0.44
EPHB4-207ENST00000489808 TRAV13-1A0A0B4J241 112 aa12.29□□□□□ -0.44
EPHB4-207ENST00000489808 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
EPHB4-207ENST00000489808 IGHV1-58A0A0C4DH39 117 aa12.28□□□□□ -0.44
EPHB4-207ENST00000489808 INAFM2P0DMQ5 153 aa12.28□□□□□ -0.44
EPHB4-207ENST00000489808 CARHSP1Q9Y2V2 147 aaKnown RBP12.28□□□□□ -0.44
EPHB4-207ENST00000489808 IGHV3-64A0A075B6Q5 118 aa12.27□□□□□ -0.45
EPHB4-207ENST00000489808 S100PP25815 95 aa12.27□□□□□ -0.45
EPHB4-207ENST00000489808 MRPS36P82909 103 aaKnown RBP12.27□□□□□ -0.45
EPHB4-207ENST00000489808 Q8N8P6 123 aa12.27□□□□□ -0.45
EPHB4-207ENST00000489808 OPRPNQ99935 248 aaPredicted RBP12.27□□□□□ -0.45
EPHB4-207ENST00000489808 LINC00528Q8N1L1 170 aa12.26□□□□□ -0.45
EPHB4-207ENST00000489808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.26□□□□□ -0.45
EPHB4-207ENST00000489808 PANO1I0J062 215 aa12.25□□□□□ -0.45
EPHB4-207ENST00000489808 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
EPHB4-207ENST00000489808 COX7A2LO14548 114 aa12.24□□□□□ -0.45
EPHB4-207ENST00000489808 RHEBQ15382 184 aa12.24□□□□□ -0.45
EPHB4-207ENST00000489808 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
EPHB4-207ENST00000489808 GNB1LQ9BYB4 327 aa12.24□□□□□ -0.45
EPHB4-207ENST00000489808 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
EPHB4-207ENST00000489808 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
EPHB4-207ENST00000489808 MALP21145 153 aa12.23□□□□□ -0.45
EPHB4-207ENST00000489808 K7EMI3 77 aa12.22□□□□□ -0.45
EPHB4-207ENST00000489808 IFI27P40305 119 aaPredicted RBP12.22□□□□□ -0.45
EPHB4-207ENST00000489808 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
EPHB4-207ENST00000489808 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
EPHB4-207ENST00000489808 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
EPHB4-207ENST00000489808 NXT2Q9NPJ8 142 aaKnown RBP12.22□□□□□ -0.45
EPHB4-207ENST00000489808 SRRM2Q9UQ35 2752 aaKnown RBP12.21□□□□□ -0.45
EPHB4-207ENST00000489808 ZNF561-AS1K7EIQ3 104 aa12.21□□□□□ -0.45
EPHB4-207ENST00000489808 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.45
EPHB4-207ENST00000489808 DPH3Q96FX2 82 aa12.21□□□□□ -0.45
EPHB4-207ENST00000489808 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
EPHB4-207ENST00000489808 COX6A2Q02221 97 aa12.2□□□□□ -0.46
EPHB4-207ENST00000489808 COX19Q49B96 90 aa12.2□□□□□ -0.46
EPHB4-207ENST00000489808 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
EPHB4-207ENST00000489808 PRSS3P2Q8NHM4 247 aa12.2□□□□□ -0.46
EPHB4-207ENST00000489808 IFITM10A6NMD0 228 aa12.19□□□□□ -0.46
EPHB4-207ENST00000489808 CHTF8P0CG12 524 aa12.19□□□□□ -0.46
EPHB4-207ENST00000489808 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
EPHB4-207ENST00000489808 IGHV3OR16-9A0A0B4J2B5 98 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms