RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HLA-DRB4P13762 266 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 G0S2P27469 103 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 FCER1GP30273 86 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 MRPL52Q86TS9 123 aaKnown RBP4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 Q8N8P6 123 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 HLA-DRB4X5D2U9 266 aa4.9□□□□□ -1.63
EXOSC3-206ENST00000489414 TRAV12-2A0A075B6T6 113 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC01546A6NGU7 62 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 CBY3A6NI87 242 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC01549A6NIU2 74 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 PRSS47A8MTI9 375 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 F5H697 171 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 SIVA1O15304 175 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 ATP5LO75964 103 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 NXPH4O95158 308 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 NUTF2P61970 127 aaKnown RBP4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 LAGE3Q14657 143 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 ORMDL2Q53FV1 153 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 Q6ZQT7 251 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 C14orf178Q8N769 122 aaPredicted RBP4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 Q8N976 141 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 IFI27L1Q96BM0 104 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
EXOSC3-206ENST00000489414 IGHV3-16A0A0C4DH30 117 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 A8MTW9 85 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 F5H768 121 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 H3BMM0 161 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 M0R143 59 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 INSP01308 110 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 ZNF415Q09FC8 603 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 C9orf85Q96MD7 179 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 CLUHP3Q96NS8 147 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 SMIM2Q9BVW6 85 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
EXOSC3-206ENST00000489414 TRAV26-2A0A0B4J265 109 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 H7C1H1 209 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 IGLC3P0DOY3 106 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 GATA1P15976 413 aaPredicted RBP4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 CTAG1AP78358 180 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 ZNF56Q15929 161 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 AMTNQ6UX39 209 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 Q6ZN92 141 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC00173Q6ZV60 143 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 NRACQ8N912 160 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 TMEM208Q9BTX3 173 aa4.87□□□□□ -1.63
EXOSC3-206ENST00000489414 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 TCAPO15273 167 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 PRSS1P07477 247 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 HTN1P15515 57 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 FXYD7P58549 80 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 RPL32P62910 135 aaKnown RBP4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC01620Q4KN68 170 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 FAM74A4Q5TZK3 123 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 RASL10AQ92737 203 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC01587Q99440 93 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 KIR2DL4Q99706 377 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 SPXQ9BT56 116 aa4.86□□□□□ -1.63
EXOSC3-206ENST00000489414 A0A087WWL8 130 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 A0A096LNJ9 63 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 A8MWV9 139 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 M0R2P5 195 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 VCYO14598 125 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 PIK3CD-AS1Q5SR53 167 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 SLC25A34Q6PIV7 304 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 RPL39LQ96EH5 51 aaKnown RBP4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 C1QTNF4Q9BXJ3 329 aa4.85□□□□□ -1.63
EXOSC3-206ENST00000489414 hDV102S1A0JD36 115 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 RHODO00212 210 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 DPM2O94777 84 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 SUMO4Q6EEV6 95 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 PTH2Q96A98 100 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 C2orf88Q9BSF0 95 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 XCL2Q9UBD3 114 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 KIF25-AS1Q9Y6Z4 181 aa4.84□□□□□ -1.63
EXOSC3-206ENST00000489414 TRBV6-5A0A0K0K1A5 114 aa4.83□□□□□ -1.64
EXOSC3-206ENST00000489414 TMEM238LA0A1B0GVL6 79 aa4.83□□□□□ -1.64
EXOSC3-206ENST00000489414 H3BS24 57 aa4.83□□□□□ -1.64
EXOSC3-206ENST00000489414 PLNP26678 52 aa4.83□□□□□ -1.64
EXOSC3-206ENST00000489414 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
EXOSC3-206ENST00000489414 SDHAF1A6NFY7 115 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 IGKCP01834 107 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 CRYGDP07320 174 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms