RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 RPP21Q9H633 154 aaKnown RBP5.87□□□□□ -1.47
SNX17-207ENST00000489402 LPAP08519 4548 aa5.87□□□□□ -1.47
SNX17-207ENST00000489402 SDHAF1A6NFY7 115 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 BCL2P10415 239 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 XCL1P47992 114 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 FOXI1Q12951 378 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 COMMD7Q86VX2 200 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 OR5A1Q8NGJ0 315 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
SNX17-207ENST00000489402 TMEM101Q96IK0 257 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 CARD19Q96LW7 228 aa5.86□□□□□ -1.47
SNX17-207ENST00000489402 IGHV1-58A0A0C4DH39 117 aa5.85□□□□□ -1.47
SNX17-207ENST00000489402 A0A0J9YXV3 536 aa5.85□□□□□ -1.47
SNX17-207ENST00000489402 I3L3M4 83 aa5.85□□□□□ -1.47
SNX17-207ENST00000489402 PMCHP20382 165 aa5.85□□□□□ -1.47
SNX17-207ENST00000489402 TAGLN2P37802 199 aaKnown RBP5.85□□□□□ -1.47
SNX17-207ENST00000489402 RNASE7Q9H1E1 156 aaKnown RBP5.85□□□□□ -1.47
SNX17-207ENST00000489402 LINC00959A0A1B0GUT2 108 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 ZNF561-AS1K7EIQ3 104 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 CCL25O15444 150 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 SS18Q15532 418 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 Q6ZRP5 223 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 MRAP2Q96G30 205 aa5.84□□□□□ -1.47
SNX17-207ENST00000489402 FOXA3P55318 350 aaPredicted RBP5.83□□□□□ -1.48
SNX17-207ENST00000489402 BLOC1S1P78537 153 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 BORCS7Q96B45 105 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
SNX17-207ENST00000489402 TRBV6-5A0A0K0K1A5 114 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 FAM231BA6NCW3 169 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 A8MWL6 223 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 K7EN84 100 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 GATCO43716 136 aaKnown RBP5.82□□□□□ -1.48
SNX17-207ENST00000489402 CD164L2Q6UWJ8 174 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 ISOC2Q96AB3 205 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 ST20Q9HBF5 79 aa5.82□□□□□ -1.48
SNX17-207ENST00000489402 LOC107984640A0A0U1RRK4 108 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 GAS8-AS1O95177 125 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 ESDP10768 282 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 MALP21145 153 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 CAMPP49913 170 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 UQCC3Q6UW78 93 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 TMEM242Q9NWH2 141 aa5.81□□□□□ -1.48
SNX17-207ENST00000489402 C7orf77A4D0Y5 90 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 TSHBP01222 138 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 SMAGPQ0VAQ4 97 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 GAGE2BQ13066 116 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 SRSF9Q13242 221 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNX17-207ENST00000489402 MRPL52Q86TS9 123 aaKnown RBP5.8□□□□□ -1.48
SNX17-207ENST00000489402 ZNF664Q8N3J9 261 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 CDC42SE2Q9NRR3 84 aa5.8□□□□□ -1.48
SNX17-207ENST00000489402 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 TMEM250H0YL14 139 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 FCER1GP30273 86 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 CT83Q5H943 113 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 FAM231DQ6ZW35 169 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 CAMK2N2Q96S95 79 aa5.79□□□□□ -1.48
SNX17-207ENST00000489402 TRBV27A0A0K0K1C4 114 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 A0A1B0GUT8 65 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 C1orf196B1AJZ1 125 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 COX7A2LO14548 114 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 APOMO95445 188 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 MT-ND6P03923 174 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 CEBPGP53567 150 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 POLR2KP53803 58 aaKnown RBP5.78□□□□□ -1.48
SNX17-207ENST00000489402 C10orf91Q5T1B1 145 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 TMEM191AQ9H0A3 160 aa5.78□□□□□ -1.48
SNX17-207ENST00000489402 TMEM218A2RU14 115 aa5.77□□□□□ -1.49
SNX17-207ENST00000489402 HIGD1CA8MV81 97 aa5.77□□□□□ -1.49
SNX17-207ENST00000489402 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.49
SNX17-207ENST00000489402 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
SNX17-207ENST00000489402 NUP35Q8NFH5 326 aa5.77□□□□□ -1.49
SNX17-207ENST00000489402 C2orf48Q96LS8 159 aa5.77□□□□□ -1.49
SNX17-207ENST00000489402 TRAV13-1A0A0B4J241 112 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 VCYO14598 125 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 PPP1R17O96001 155 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 RAB4AP20338 218 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 C9orf116Q5BN46 136 aaPredicted RBP5.76□□□□□ -1.49
SNX17-207ENST00000489402 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 TSKUQ8WUA8 353 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 KIR2DL4Q99706 377 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 SMDT1Q9H4I9 107 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
SNX17-207ENST00000489402 CARHSP1Q9Y2V2 147 aaKnown RBP5.76□□□□□ -1.49
SNX17-207ENST00000489402 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
SNX17-207ENST00000489402 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 C9JQL5 133 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.75□□□□□ -1.49
SNX17-207ENST00000489402 SUMO2P61956 95 aaKnown RBP5.75□□□□□ -1.49
SNX17-207ENST00000489402 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
SNX17-207ENST00000489402 C1orf137Q5JT78 98 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 C5orf38Q86SI9 138 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 SMIM7Q9BQ49 75 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
SNX17-207ENST00000489402 PPP1R2P9O14990 202 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms